YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30262060, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	316 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262060, gi|....

Description	E-value	Query Range	Subject Range
gi\|52143391, gi\|... - gi\|52143391\|ref\|YP_083436.1\| high-affinity zinc uptake system periplasmic-binding protein [Bacillus ...	2.0E-90	[1..316]	[1..316]
gi\|47566802, gi\|... - gi\|47566802\|ref\|ZP_00237520.1\| adhesion lipoprotein [Bacillus cereus G9241], gi\|47556431\|gb\|EAL14764...	5.0E-90	[1..316]	[1..316]
gi\|49332795, gi\|... - gi\|49481239\|ref\|YP_036183.1\| high-affinity zinc uptake system periplasmic-binding protein [Bacillus ...	7.0E-90	[1..316]	[1..316]
gi\|42737091, gi\|... - gi\|42781169\|ref\|NP_978416.1\| adhesion lipoprotein [Bacillus cereus ATCC 10987], gi\|42737091\|gb\|AAS41...	8.0E-90	[1..316]	[1..316]
gi\|218162107, gi... - gi\|218234150\|ref\|YP_002366742.1\| putative adhesion lipoprotein [Bacillus cereus B4264], gi\|218162107... gi\|30020158, gi\|... - gi\|30020158\|ref\|NP_831789.1\| high-affinity zinc uptake system protein znuA precursor [Bacillus cereu...	1.0E-89	[1..316]	[1..316]
gi\|74488072, gi\|... - gi\|75764440\|ref\|ZP_00743938.1\| High-affinity zinc uptake system protein znuA precursor [Bacillus thu... gi\|218897026, gi... - gi\|218897026\|ref\|YP_002445437.1\| putative adhesion lipoprotein [Bacillus cereus G9842], gi\|218540729... gi\|228900644, gi... - gi\|228900644\|ref\|ZP_04064864.1\| Laminin-binding surface protein [Bacillus thuringiensis IBL 4222], g... gi\|228965041, gi... - gi\|228965041\|ref\|ZP_04126138.1\| Laminin-binding surface protein [Bacillus thuringiensis serovar sott...	3.0E-89	[1..316]	[1..316]
gi\|67874743, gi\|... - gi\|67874743\|ref\|ZP_00504356.1\| Periplasmic solute binding protein [Clostridium thermocellum ATCC 274... gi\|196253589, gi... - gi\|196253589\|ref\|ZP_03152210.1\| periplasmic solute binding protein [Clostridium thermocellum DSM 415...	6.0E-89	[1..314]	[1..316]
gi\|89153264, gi\|... - gi\|89208795\|ref\|ZP_01187281.1\| Periplasmic solute binding protein [Bacillus weihenstephanensis KBAB4...	6.0E-87	[1..316]	[1..316]
gi\|89202777, gi\|... - gi\|89202777\|ref\|ZP_01181488.1\| Periplasmic solute binding protein [Bacillus cereus subsp. cytotoxis ...	1.0E-86	[1..316]	[1..316]
gi\|48826259 - ref\|ZP_00287481.1\| COG0803: ABC-type metal ion transport system, periplasmic component/surface adhes... gi\|68196373, gi\|... - gi\|69244432\|ref\|ZP_00602848.1\| Periplasmic solute binding protein [Enterococcus faecium DO], gi\|6819...	4.0E-86	[3..313]	[2..310]

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Predicted Domain #1

Region A:
Residues: [1-316]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRLTIFSF LLIFTLIFTG CSNTKEGNAK KDGKLTVYTT IFPLADFAKK IGGDYVTVEA  60
   61 IYPPGADSHT FEPSQKQTVK VAKADLFVYN GAELEPFAEK MEKSLQKENV KIVNASKGIE 120
  121 LRTSTEEEHH DHGDGHKEDE HHHDKDPHIW LDPTLAMKQA EKIKNALVAL QPDHKQEFEK 180
  181 NFAALQTKFT DLDDQFKAVV ANAKTKDILV SHAAYGYWEQ RYGLKQIAIA GISASDEPSQ 240
  241 KQLADITKTV KEHNLKYILF ETFSTPKVAS VIQKETGTKV LRLNHLATIS EDDAKNNKDY 300
  301 FTLMEENVNT LKEATN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	76.0
Match:	2o1eA
Description:	No description for 2o1eA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits