YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30256586, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	496 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30256586, gi|....

Description	E-value	Query Range	Subject Range
gi\|56419203, gi\|... - gi\|56419203\|ref\|YP_146521.1\| acyl-CoA synthetase [Geobacillus kaustophilus HTA426], gi\|56379045\|dbj\|...	0.0	[2..495]	[1..511]
gi\|77996178, gi\|... - gi\|78044063\|ref\|YP_360551.1\| long-chain-fatty-acid--CoA ligase [Carboxydothermus hydrogenoformans Z-...	0.0	[2..496]	[27..542]
gi\|106772735, gi... - gi\|148656221\|ref\|YP_001276426.1\| AMP-dependent synthetase and ligase [Roseiflexus sp. RS-1], gi\|1485...	0.0	[3..496]	[4..511]
gi\|159893354, gi... - gi\|159900315\|ref\|YP_001546562.1\| AMP-dependent synthetase and ligase [Herpetosiphon aurantiacus ATCC...	0.0	[2..493]	[1..497]
gi\|52079510, gi\|... - gi\|52784875\|ref\|YP_090704.1\| acyl-CoA synthetase [Bacillus licheniformis ATCC 14580], gi\|52347377\|gb...	0.0	[2..496]	[1..512]
gi\|49610952, gi\|... - gi\|50120426\|ref\|YP_049593.1\| non-ribosomal peptide synthetase [Pectobacterium atrosepticum SCRI1043]...	0.0	[4..495]	[5831..6328]
gi\|53763480, gi\|... - gi\|75910191\|ref\|YP_324487.1\| AMP-dependent synthetase and ligase [Anabaena variabilis ATCC 29413], g...	0.0	[2..492]	[1..496]
gi\|55981432, gi\|... - gi\|55981432\|ref\|YP_144729.1\| long-chain-fatty-acid--CoA ligase [Thermus thermophilus HB8], gi\|557728...	0.0	[3..496]	[27..558]
gi\|27817222 - gi\|27817222\|gb\|AAO23333.1\| NcpA [Nostoc sp. ATCC 53789]	0.0	[2..494]	[2666..3174]

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Predicted Domain #1

Region A:
Residues: [1-496]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGIAYWIEK RAYLHPDRIA IITEEEEMTY KQLHEYVSKV AAYLIYELNV KKGERIAILS  60
   61 QNSLEYIVLF FAIAKVECIA VPLNIRLTEN ELIFQLKDSG TTVLFVEKTF QNMALSMQKV 120
  121 SYVQRVISIT SLKEIEDRKI DNFVEKNESA SFIICYTSGT TGKPKGAVLT QENMFWNALN 180
  181 NTFAIDLTMH DRSIVLLPLF HIGGIGLFAF PTLFAGGVII VPRKFEPTKA LSMIEKHKVT 240
  241 VVMGVPTIHQ ALINCSKFET TNLQSVRWFY NGGAPCPEEL MREFIDRGFL FGQGFGMTET 300
  301 SPTVFMLSEE DARRKVGSIG KPVLFCDYEL IDENKNKVEV GEVGELLIRG PNVMKEYWNR 360
  361 PDATEETIQD GWLCTGDLAR VDEDGFVYIV GRKKEMIISG GENIYPLEVE QVINKLSDVY 420
  421 EVAVVGRQHV KWGEIPIAFI VKKSSSVLIE KDVIEHCRLF LAKYKIPKEI VFLKELPKNA 480
  481 TGKIQKAQLV NQLKSR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	102.0
Match:	2v7bA
Description:	No description for 2v7bA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits