YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|49178708, gi\|...
Organism:	Bacillus anthracis str. Sterne
Length:	321 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49178708, gi|....

Description	E-value	Query Range	Subject Range
gi\|71155563, gi\|... - gi\|71368737\|ref\|ZP_00659224.1\| Arsenical-resistance protein ACR3 [Nocardioides sp. JS614], gi\|711555...	4.0E-65	[1..316]	[238..572]
gi\|148568161, gi... - gi\|148656051\|ref\|YP_001276256.1\| arsenical-resistance protein [Roseiflexus sp. RS-1], gi\|148568161\|g...	4.0E-63	[1..318]	[19..355]
gi\|42555521, gi\|... - gi\|46124403\|ref\|XP_386755.1\| hypothetical protein FG06579.1 [Gibberella zeae PH-1], gi\|42555521\|gb\|E...	6.0E-60	[1..320]	[34..371]
gi\|37201567, gi\|... - gi\|37677022\|ref\|NP_937418.1\| arsenite efflux pump ACR3 [Vibrio vulnificus YJ016], gi\|37201567\|dbj\|BA...	5.0E-59	[1..318]	[31..367]
gi\|56419123, gi\|... - gi\|56419123\|ref\|YP_146441.1\| arsenic oxyanion-translocation pump [Geobacillus kaustophilus HTA426], ...	7.0E-59	[1..318]	[9..345]
gi\|7447127 - pir\|\|E69220 conserved hypothetical protein MTH900 - Methanobacterium thermoautotrophicum (strain Del... gi\|15678920, gi\|... - gi\|2621995\|gb\|AAB85398.1\| conserved protein [Methanothermobacter thermautotrophicus str. Delta H], g...	7.0E-59	[1..317]	[17..352]
gi\|5802942 - gi\|5802942\|gb\|AAD51846.1\|AF178758_2 ArsB [Bacillus sp. CDB3] gi\|5802942 - gi\|5802942\|gb\|AAD51846.1\| ArsB [Bacillus sp. CDB3]	1.0E-58	[1..318]	[9..345]
gi\|89319002, gi\|... - gi\|89340879\|ref\|ZP_01193125.1\| Arsenical-resistance protein ACR3 [Mycobacterium flavescens PYR-GCK],...	2.0E-58	[1..318]	[17..353]
gi\|39942638, gi\|... - gi\|39942638\|ref\|XP_360856.1\| hypothetical protein MGG_03399 [Magnaporthe grisea 70-15], gb\|EAA51804....	2.0E-58	[1..320]	[51..388]
gi\|78220238, gi\|... - gi\|78357833\|ref\|YP_389282.1\| arsenical-resistance protein [Desulfovibrio desulfuricans subsp. desulf...	2.0E-58	[1..318]	[9..345]

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Predicted Domain #1

Region A:
Residues: [1-225]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTIEKIQTF IILFAVTCGI ILGQFNVIHM YSDKFIVPFL FFMLYGLFLS IPLKEIKNGF  60
   61 RNLKFAGTSL TINFLWTPLL AWGLGALFLS DHPALWVGFI MLMVTPCTDW YLIFTEIAKG 120
  121 NVALSTAILP VNLILQVLLL PIYLFLFAGV MKTVAVSVLI ESIVIVIVLP FLLAHATKFI 180
  181 MNKLKKAETL ENKLIPFFSS AQIVFLSLAI VAMFASQGKY LLQNM

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	22.173925
Match:	PF01758.7
Description:	No description for PF01758.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [226-321]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVVLLLLIPV LLFFIINFVL GQFIRRVMRL SYKDTVSLNL TTLARNSPVA LAIAVTAFPD  60
   61 EPLIALALVI GPLIELPVLA CVSQVLLLIK KKRQYI

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits