YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30261922, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	386 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30261922, gi|....

Description	E-value	Query Range	Subject Range
gi\|68388302 - gi\|68388302\|ref\|XP_696268.1\| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]	4.0E-60	[23..383]	[1934..2277]
gi\|42781037, gi\|... - gi\|42781037\|ref\|NP_978284.1\| non-hemolytic enterotoxin A [Bacillus cereus ATCC 10987], gi\|42736958\|g...	9.0E-51	[1..386]	[1..386]
gi\|68034233 - gi\|68034233\|gb\|AAY84866.1\| enterotoxin A [Bacillus cereus]	2.0E-49	[1..386]	[1..386]
gi\|74488351, gi\|... - gi\|75764162\|ref\|ZP_00743739.1\| Non-hemolytic enterotoxin lytic component L2 [Bacillus thuringiensis ...	2.0E-49	[1..386]	[1..386]
gi\|49481718, gi\|... - gi\|49481718\|ref\|YP_036059.1\| enterotoxin; non-hemolytic enterotoxin lytic component L2 [Bacillus thu...	2.0E-49	[1..386]	[1..386]
gi\|30019951, gi\|... - gi\|30019951\|ref\|NP_831582.1\| non-hemolytic enterotoxin lytic component L2 [Bacillus cereus ATCC 1457... gi\|218544085, gi... - gi\|218896847\|ref\|YP_002445258.1\| enterotoxin A [Bacillus cereus G9842], gi\|218544085\|gb\|ACK96479.1\| ... gi\|228656354, gi... - gi\|229127238\|ref\|ZP_04256235.1\| Hemolytic enterotoxin [Bacillus cereus BDRD-Cer4], gi\|228656354\|gb\|E... gi\|228794844, gi... - gi\|228964906\|ref\|ZP_04126011.1\| Hemolytic enterotoxin [Bacillus thuringiensis serovar sotto str. T04... gi\|228852101, gi... - gi\|228907609\|ref\|ZP_04071466.1\| Hemolytic enterotoxin [Bacillus thuringiensis IBL 200], gi\|228852101... gi\|228859136, gi... - gi\|228900495\|ref\|ZP_04064720.1\| Hemolytic enterotoxin [Bacillus thuringiensis IBL 4222], gi\|22885913... gi\|228638941, gi... - gi\|229144528\|ref\|ZP_04272931.1\| Hemolytic enterotoxin [Bacillus cereus BDRD-ST24], gi\|228638941\|gb\|E...	3.0E-49	[1..386]	[1..386]
gi\|52143538, gi\|... - gi\|52143538\|ref\|YP_083293.1\| enterotoxin; non-hemolytic enterotoxin lytic component L2 [Bacillus cer...	3.0E-49	[1..386]	[1..386]
gi\|89205103, gi\|... - gi\|89205103\|ref\|ZP_01183675.1\| haemolytic enterotoxin [Bacillus weihenstephanensis KBAB4], gi\|891568...	6.0E-49	[1..386]	[1..386]

Back

Predicted Domain #1

Region A:
Residues: [1-386]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTLITGLL VTAVSTSCFI PVSAYAKEGQ TEVKTVYAQN VIAPNTLSNS IRMLGSQSPL  60
   61 IQAYGLVILQ QPDIKVNAMS SLTNHQKFAK ANVREWIDEY NPKLIDLNQE MMRYSTRFNS 120
  121 YYSKLYELAG NVNEDEQAKA DFTNAYGKLQ LQVQSIQESM EQDLLELNRF KTVLDKDSSN 180
  181 LSIKADEAIK TLQGSSGDIV KLREDIKRIQ GEIQAELTTI LNRPQEIIKG SINIGKQVFT 240
  241 ITNQTAQTKT IDFVSIGTLS NEIVNAADSQ TREAALRIQQ KQKELLPLIQ KLSQTEAEAT 300
  301 QITFVEDQVS SFTELIDRQI TTLETLLSDW KVLNNNMIQI QKNVEEGTYT DSSLLQKHFN 360
  361 QIKKVSDEMN KQTNQFEDYV TNVEVH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	36.154902
Match:	2nrjA
Description:	No description for 2nrjA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits