YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30256121, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	557 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30256121, gi|....

Description	E-value	Query Range	Subject Range
ILVD_BACC1 - Dihydroxy-acid dehydratase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=ilvD PE=3 SV=2	0.0	[1..557]	[1..557]
ILVD_BACHK - Dihydroxy-acid dehydratase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=ilvD PE=3 SV... gi\|195994055, gi... - gi\|196033621\|ref\|ZP_03101033.1\| dihydroxy-acid dehydratase [Bacillus cereus W], gi\|195994055\|gb\|EDX5... gi\|229121441, gi... - gi\|229121441\|ref\|ZP_04250668.1\| Dihydroxy-acid dehydratase [Bacillus cereus 95/8201], gi\|228661905\|g... ILVD_BACHK - Dihydroxy-acid dehydratase OS=Bacillus thuringiensis subsp. konkukian GN=ilvD PE=3 SV=1	0.0	[1..557]	[1..557]
gi\|228650732, gi... - gi\|229132722\|ref\|ZP_04261568.1\| Dihydroxy-acid dehydratase [Bacillus cereus BDRD-ST196], gi\|22865073... gi\|229166760, gi... - gi\|229166760\|ref\|ZP_04294510.1\| Dihydroxy-acid dehydratase [Bacillus cereus AH621], gi\|228616757\|gb\|... ILVD_BACWK - Dihydroxy-acid dehydratase OS=Bacillus weihenstephanensis (strain KBAB4) GN=ilvD PE=3 SV=1	0.0	[1..557]	[1..557]
ILVD_BACCN - Dihydroxy-acid dehydratase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391...	0.0	[1..557]	[1..557]
ILVD_BACCR - Dihydroxy-acid dehydratase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / ...	0.0	[1..557]	[1..557]
gi\|47565577, gi\|... - gi\|47565577\|ref\|ZP_00236618.1\| dihydroxy-acid dehydratase [Bacillus cereus G9241], gi\|47557567\|gb\|EA...	0.0	[1..557]	[1..557]
ILVD_BACCZ - Dihydroxy-acid dehydratase OS=Bacillus cereus (strain ZK / E33L) GN=ilvD PE=3 SV=1	0.0	[1..557]	[1..557]
ILVD_GEOKA - Dihydroxy-acid dehydratase OS=Geobacillus kaustophilus (strain HTA426) GN=ilvD PE=3 SV=1 ILVD_GEOKA - Dihydroxy-acid dehydratase OS=Geobacillus kaustophilus GN=ilvD PE=3 SV=1	0.0	[2..553]	[5..559]
ILVD_BACLD - Dihydroxy-acid dehydratase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 1...	0.0	[1..553]	[4..558]

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Predicted Domain #1

Region A:
Residues: [1-557]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSDMIKKGF DKAPHRSLLK ATGLKDEDFD KPFIAICNSF IEIIPGHKHL NEFGKLVKEA  60
   61 VRAAGMVPFE FNTIGVDDGI AMGHIGMRYS LPSREIIADS VETVVNAHWF DGMICIPNCD 120
  121 KITPGMMMAA LRINIPTVFV SGGPMAAGKT SKGDVVDLSS VFEGVGAYQS GKISEEELKD 180
  181 IEDHGCPSCG SCSGMFTANS MNCLCEVLGL ALPGNGSILA IDPRREELIK QAAEKLKILI 240
  241 ERDIKPRDIV TEEAIDDAFA LDMAMGGSTN TVLHTLALAQ EAGLDYDMNR IDAVSRRVPH 300
  301 LCKVSPASNW HMEDIDRAGG ISAILKEMSR KEGVLHLDRI TATGQTLREN IAHAEIKDKE 360
  361 VIHSLENPHS EEGGLRILKG NLAKDGAVIK SGATEVKRFE GPCVIFNSQD EALAGIMLGK 420
  421 VKKGDVVVIR YEGPRGGPGM PEMLAPTSAI AGMGLGADVA LLTDGRFSGA SRGISVGHIS 480
  481 PEAAAGGTIA LLEQGDIVCI DVEERLLEVR VSDEELGKRK KEWKRPEPKV KTGWLGRYAQ 540
  541 MVTSANTGAV LKIPNFD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	158.0
Match:	2gp4A
Description:	No description for 2gp4A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits