YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30261888, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	178 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30261888, gi|....

Description	E-value	Query Range	Subject Range
gi\|51856588, gi\|... - gi\|51892899\|ref\|YP_075590.1\| bifunctional methionine sulfoxide reductase A/B protein [Symbiobacteriu...	5.0E-78	[1..177]	[1..177]
gi\|22294607, gi\|... - gi\|22298428\|ref\|NP_681675.1\| methionine sulfoxide reductase A [Thermosynechococcus elongatus BP-1], ...	1.0E-73	[3..160]	[45..204]
MSRA_METTH - Peptide methionine sulfoxide reductase MsrA OS=Methanothermobacter thermautotrophicus (strain ATCC 2... gi\|7446679 - gi\|7446679\|pir\|\|F69170 peptide methionine sulfoxide reductase - Methanobacterium thermoautotrophicum...	2.0E-73	[1..160]	[2..161]
gi\|88917938, gi\|... - gi\|88935259\|ref\|ZP_01140893.1\| Methionine sulfoxide reductase A [Geobacter uraniumreducens Rf4], gi\|...	2.0E-73	[5..176]	[35..206]
gi\|86607734 - gi\|86607734\|ref\|YP_476496.1\| methionine-S-sulfoxide reductase [Cyanobacteria bacterium Yellowstone B... gi\|86556276, gi\|... - gi\|86607734\|ref\|YP_476496.1\| methionine-S-sulfoxide reductase [Synechococcus sp. JA-2-3B'a(2-13)], g...	3.0E-73	[3..162]	[47..208]
gi\|91202488 - gi\|91202488\|emb\|CAJ72127.1\| strongly similar to peptide methionine sulfoxide reductase [Candidatus K...	3.0E-73	[2..177]	[61..236]
gi\|25308482 - pir\|\|H83830 peptide methionine sulfoxide reductase BH1448 [imported] - Bacillus halodurans (strain C... gi\|10174065, gi\|... - gi\|15614011\|ref\|NP_242314.1\| peptide methionine sulfoxide reductase [Bacillus halodurans C-125], gi\|...	4.0E-73	[1..177]	[1..177]
gi\|86605185, gi\|... - gi\|86605185\|ref\|YP_473948.1\| methionine-S-sulfoxide reductase [Cyanobacteria bacterium Yellowstone A... gi\|86605185, gi\|... - gi\|86605185\|ref\|YP_473948.1\| methionine-S-sulfoxide reductase [Synechococcus sp. JA-3-3Ab], gi\|86553...	7.0E-73	[3..160]	[47..206]
gi\|42736921, gi\|... - gi\|42781000\|ref\|NP_978247.1\| peptide methionine sulfoxide reductase [Bacillus cereus ATCC 10987], gi...	1.0E-72	[1..178]	[1..178]
gi\|172056245, gi... - gi\|68056286\|ref\|ZP_00540413.1\| Methionine sulfoxide reductase A:Methionine sulfoxide reductase B [Ex...	2.0E-72	[6..178]	[1..173]

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Predicted Domain #1

Region A:
Residues: [1-178]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEKTYELAT FAGGCFWCMV KPFDELPDIH KVLSGYAGGH VENPTYEQVK AGTSGHLEVV  60
   61 QITFDPSIFP YEKLLNLYWP QIDPTDDGGQ FFDRGPSYRT AIFYHTETQK ELAEKSKHSL 120
  121 AESGMFKDPI VTEIRPAAPF YEAEEYHQHF YKKNPEKYAT EQKESGREDF IKENWQKK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	72.154902
Match:	2j89A
Description:	No description for 2j89A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits