YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30256101, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	305 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30256101, gi|....

Description	E-value	Query Range	Subject Range
gi\|20517485, gi\|... - gi\|20808833\|ref\|NP_624004.1\| cysteine synthase [Thermoanaerobacter tengcongensis MB4], gi\|20517485\|g... gi\|20808833 - gi\|20808833\|ref\|NP_624004.1\| Cysteine synthase [Thermoanaerobacter tengcongensis MB4]	4.0E-93	[2..300]	[7..305]
gi\|166854037, gi... - gi\|167039797\|ref\|YP_001662782.1\| cysteine synthase A [Thermoanaerobacter sp. X514], gi\|166854037\|gb\|...	8.0E-93	[2..300]	[7..305]
gi\|242258636, gi... - gi\|242258636\|ref\|ZP_04803398.1\| cysteine synthase A [Thermoanaerobacter sp. X513], gi\|242229842\|gb\|E... gi\|166855540, gi... - gi\|76796109\|ref\|ZP_00778477.1\| Cysteine synthase K/M:Cysteine synthase A [Thermoanaerobacter ethanol... gi\|167039426, gi... - gi\|167039426\|ref\|YP_001662411.1\| cysteine synthase A [Thermoanaerobacter sp. X514], gi\|166853666\|gb\|... gi\|241903580, gi... - gi\|241903580\|ref\|ZP_04788302.1\| cysteine synthase A [Thermoanaerobacter brockii subsp. finnii Ako-1]...	4.0E-92	[2..300]	[7..305]
gi\|67850867, gi\|... - gi\|67874931\|ref\|ZP_00504482.1\| Cysteine synthase K/M:Cysteine synthase K [Clostridium thermocellum A... gi\|196252125, gi... - gi\|196252125\|ref\|ZP_03150787.1\| cysteine synthase A [Clostridium thermocellum DSM 4150], gi\|19619839...	2.0E-91	[2..305]	[3..309]
gi\|70727496, gi\|... - gi\|70727496\|ref\|YP_254412.1\| cysteine synthase [Staphylococcus haemolyticus JCSC1435], gi\|68448222\|d... gi\|228476212, gi... - gi\|228476212\|ref\|ZP_04060915.1\| cysteine synthase A [Staphylococcus hominis SK119], gi\|228269697\|gb\|...	6.0E-90	[5..304]	[7..306]
gi\|251806688, gi... - gi\|251809820\|ref\|ZP_04824293.1\| cysteine synthase [Staphylococcus epidermidis BCM-HMP0060], gi\|25180... gi\|242241598, gi... - gi\|242241598\|ref\|ZP_04796043.1\| cysteine synthase [Staphylococcus epidermidis W23144], gi\|242234979\|... CYSK_STAEQ - Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=cysK PE=3 SV=1 CYSK_STAEP - (Q8CMT6) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyas... CYSK_STAES - Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=cysK PE=3 SV=1	1.0E-89	[7..304]	[9..306]
gi\|75910354, gi\|... - gi\|75910354\|ref\|YP_324650.1\| cystathionine beta-synthase [Anabaena variabilis ATCC 29413], gi\|757040...	1.0E-89	[1..305]	[1..307]
gi\|118413359, gi... - gi\|86154513\|ref\|ZP_01072681.1\| cysteine synthase A [Campylobacter fetus subsp. fetus 82-40], gi\|8584...	2.0E-89	[1..305]	[1..304]
gi\|73663552, gi\|... - gi\|73663552\|ref\|YP_302333.1\| cysteine synthase [Staphylococcus saprophyticus subsp. saprophyticus AT...	3.0E-89	[5..304]	[7..306]
gi\|68263061, gi\|... - gi\|68535462\|ref\|YP_250167.1\| hypothetical protein jk0394 [Corynebacterium jeikeium K411], gi\|6826306...	2.0E-88	[2..305]	[3..307]

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Predicted Domain #1

Region A:
Residues: [1-305]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLCENITEL IGDTPVVRLS KFIPEDAADV YVKLEMFNPS RSVKDRAAYN LLHVAEENGL  60
   61 IKPGDTIIEP TSGNTGIGLA MNAAAKGYKA ILIMPDNMSK ERINLLKAYG AEVVLTPAEQ 120
  121 RMPGAIAKAL ELQKEIPNSF IPQQFENPAN PNIHRYTTAL EIYEQMDGEL DAFVATAGTG 180
  181 GTITGTGETL KEKLPNLYIA VVEPKGSPVL SGGVPGPHKL VGTSPGFIPK NLNTEVYNEI 240
  241 IQIADEEALT TMRNLARQEG LLVGPSSGAS VYAAIMIAKR LGTGKKVLCV APDTGERYLS 300
  301 MGLFE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	89.30103
Match:	2q3bA
Description:	No description for 2q3bA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits