YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30256097, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	327 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30256097, gi|....

Description	E-value	Query Range	Subject Range
FABH_CALS8 - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 434...	1.0E-79	[1..324]	[1..327]
FABH_CLOAB - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clostridium acetobutylicum GN=fabH PE=3 SV=1 FABH_CLOAB - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792...	8.0E-76	[1..324]	[1..323]
FABH_METCA - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Methylococcus capsulatus GN=fabH PE=3 SV=1 FABH_METCA - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 1...	2.0E-75	[1..324]	[1..321]
FABH_CLOPS - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clostridium perfringens (strain SM101 / Type A) GN=fa...	7.0E-75	[4..323]	[3..323]
FABH_CLOP1 - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 ...	7.0E-75	[3..323]	[2..323]
FABH_XANCP - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Xanthomonas campestris pv. campestris (strain ATCC 33... FABH_XANCP - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Xanthomonas campestris pv. campestris GN=fabH PE=3 SV...	3.0E-74	[1..324]	[1..325]
FABH2_BACHD - 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 OS=Bacillus halodurans (strain ATCC BAA-125 / ... FAH2_BACHD, FABH... - (Q9KET5) 3-oxoacyl-[acyl-carrier-protein] synthase III protein 2 (EC 2.3.1.41) (Beta-ketoacyl-ACP sy...	4.0E-74	[1..324]	[1..325]
FABH_XANC8 - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Xanthomonas campestris pv. campestris (strain 8004) G...	7.0E-74	[1..324]	[1..325]
FABH_XANC5 - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10)...	8.0E-74	[1..324]	[1..325]
gi\|39983582, gi\|... - gi\|39996701\|ref\|NP_952652.1\| 3-oxoacyl-(acyl-carrier-protein) synthase III [Geobacter sulfurreducens...	8.0E-74	[4..324]	[2..325]

Back

Predicted Domain #1

Region A:
Residues: [1-327]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSKSRITAI GTHVPNQILS NNDLEKMIDT NDEWIVQRTG MKERRIASED EYSSNLAIKA  60
   61 VENLCTTYKK NLEDVDCIIV ATTTADYVFP SVACQIQQYF NIPHTMAFDL NATCAGFTYG 120
  121 LHVGNSLITS GSHKKVLVVA TETLSKVTDY TDRTTCILFG DGAGAILLER DENKPSFIAY 180
  181 HMGTNGHGGI HLYRTNLSTT MNDTPLQTNE KIVQNGREVY KWATRTVPVG IKELLHTANM 240
  241 KMDDIDWFIP HSANLRMIES ICEKSQIPIH KTLTSVEYMG NTSSVSIPLA LDLARKKGKL 300
  301 NNGDTLLLYG FGGGLTHLGL IVEWDLS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	73.69897
Match:	2ebdA
Description:	No description for 2ebdA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits