YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30261809, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	299 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30261809, gi|....

Description	E-value	Query Range	Subject Range
gi\|42780902, gi\|... - gi\|42780902\|ref\|NP_978149.1\| cation efflux family protein [Bacillus cereus ATCC 10987], gi\|42736823\|...	2.0E-67	[1..299]	[1..299]
gi\|29895390, gi\|... - gi\|30019845\|ref\|NP_831476.1\| cobalt-zinc-cadmium resistance protein czcD [Bacillus cereus ATCC 14579...	5.0E-67	[1..299]	[1..299]
gi\|163939615, gi... - gi\|89205203\|ref\|ZP_01183775.1\| Cation efflux protein [Bacillus weihenstephanensis KBAB4], gi\|8915694...	9.0E-67	[1..299]	[1..299]
gi\|228859275, gi... - gi\|228900388\|ref\|ZP_04064617.1\| CzcD (Cation-efflux system membrane protein) [Bacillus thuringiensis... gi\|74493517, gi\|... - gi\|75758982\|ref\|ZP_00739091.1\| Cobalt-zinc-cadmium resistance protein czcD [Bacillus thuringiensis s...	1.0E-66	[1..299]	[1..299]
gi\|47565486, gi\|... - gi\|47565486\|ref\|ZP_00236527.1\| cation efflux family protein [Bacillus cereus G9241], gi\|47557476\|gb\|...	4.0E-65	[1..299]	[1..299]
CZCD_BACSU - Cadmium, cobalt and zinc/H(+)-K(+) antiporter OS=Bacillus subtilis (strain 168) GN=czcD PE=1 SV=1 gi\|221314921 - gi\|221314921\|ref\|ZP_03596726.1\| cation-efflux system membrane protein [Bacillus subtilis subsp. subt... gi\|221319843 - gi\|221319843\|ref\|ZP_03601137.1\| cation-efflux system membrane protein [Bacillus subtilis subsp. subt... gi\|221324123 - gi\|221324123\|ref\|ZP_03605417.1\| cation-efflux system membrane protein [Bacillus subtilis subsp. subt... CZCD_BACSU - Cadmium, cobalt and zinc/H(+)-K(+) antiporter OS=Bacillus subtilis GN=czcD PE=1 SV=1	2.0E-62	[1..298]	[1..299]
gi\|51977122, gi\|... - gi\|52143653\|ref\|YP_083175.1\| cobalt-zinc-cadmium resistance protein [Bacillus cereus E33L], gi\|51977...	2.0E-62	[1..299]	[1..299]
gi\|49331874, gi\|... - gi\|49480318\|ref\|YP_035939.1\| cobalt-zinc-cadmium resistance protein [Bacillus thuringiensis serovar ...	2.0E-62	[1..299]	[1..299]
gi\|21399643, gi\|... - gi\|65319089\|ref\|ZP_00392048.1\| COG1230: Co/Zn/Cd efflux system component [Bacillus anthracis str. A2...	9.0E-62	[1..299]	[1..299]
gi\|21107476, gi\|... - gi\|21242070\|ref\|NP_641652.1\| cobalt-zinc-cadmium resistance protein [Xanthomonas axonopodis pv. citr...	5.0E-61	[1..294]	[1..295]

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Predicted Domain #1

Region A:
Residues: [1-299]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHSHNHGHS KNKKALLLAF LLTTSFMIAE VIGGFVTNSL ALLSDAGHML SDAVSLALSL  60
   61 LAFKLGEKTA TAAKTYGYKR VEMLAALCNG VVLIVVSVYI FIEAIRRFKE PVEIASNGML 120
  121 IIAVLGLLIN ILSAWILMRG GDVKGNLNLR SAFLHVLGDL LGSVGAIIAA LLIKFFGWTA 180
  181 ADAIASILVS ILVIISGWRV TRDTVHILME GAPQHINVEE VKSTLLNITV VKEVHDLHIW 240
  241 SVTSDFQVLT CHLIIKGNET QSVLKEATEV LKEKFHVEHV TIQVEIDGEF HHSETTCKV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	51.39794
Match:	2qfiA
Description:	No description for 2qfiA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits