YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|49184533, gi\|...
Organism:	Bacillus anthracis str. Sterne
Length:	516 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49184533, gi|....

Description	E-value	Query Range	Subject Range
gi\|91084087 - gi\|91084087\|ref\|XP_968449.1\| PREDICTED: similar to sodium/solute symporter [Tribolium castaneum]	8.0E-69	[2..499]	[10..540]
gi\|114684359 - gi\|114684359\|ref\|XP_531445.2\| PREDICTED: solute carrier family 5 (inositol transporters), member 3 [...	4.0E-67	[1..497]	[5..542]
gi\|76581538, gi\|... - gi\|76812085\|ref\|YP_332052.1\| acetate permease [Burkholderia pseudomallei 1710b], gi\|76581538\|gb\|ABA5...	7.0E-66	[2..516]	[237..763]
gi\|45709089, gi\|... - gi\|45709089\|gb\|AAH67621.1\| Solute carrier family 5 (sodium/glucose cotransporter), member 1 [Danio r...	3.0E-65	[2..499]	[25..556]
gi\|109093932 - gi\|109093932\|ref\|XP_001112212.1\| PREDICTED: solute carrier family 5 (sodium/glucose cotransporter), ...	7.0E-65	[2..499]	[25..559]
HGNC:11039\|Ensem... - carrier family 5 (low affinity glucose cotransporter), member 4 SLC5A4 - solute carrier family 5 (low affinity glucose cotransporter), member 4 gi\|148921768, gi... - gi\|157170096\|gb\|AAI53070.1\| Solute carrier family 5 (low affinity glucose cotransporter), member 4 [...	5.0E-64	[2..499]	[25..559]
gi\|126352558, gi... - gi\|13539197\|emb\|CAC35538.1\| Na+/glucose co-transporter [Equus caballus], gi\|126352558\|ref\|NP_0010753...	1.0E-63	[2..499]	[25..559]

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Predicted Domain #1

Region A:
Residues: [1-148]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTTAFALFL IIVLGTLVIT YFASKKTKNA SEFYTAGGGL TGWQNGLAIA GDYMSAASFL  60
   61 GIAGAIALTG FDGFFYSIGF LVAYLVVLYL VAEPLRNLGK YTLADMIAAR FDAKKVRGVA 120
  121 ALNTMTISIF YMIAQLVGAG ALIKLLLG

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [149-420]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IEYTTSVLIV GTLMTVYVIF GGMTATSWVQ IVKAVLLMAG TFIISVIVFA KFNFSVTEMF  60
   61 AQMKTATPLK DSFLNPGVKY KDGLDTLSLN LGLVLGTAGL PHILVRFFTV RDAKTARQSV 120
  121 VYATWLIGAF YIMTIFLGFG AAAFVGNEAI MKANPAGNMA APLLAKALGG DFLFAFVSAI 180
  181 AFATILAVVA GLVLTAASAF AHDFYNEIIR KGKSTEKEQV SMARYASIGV AVLSIILALF 240
  241 AQTLNVAFLV SLAFAVAASA NLPVILFTIY WK

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [421-516]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RFNTTGAISG MIVGLVSAIV LVALSPNVWN PVAGKAIFVG EAIFPYTTPG IISIPLGFLA  60
   61 AYLGTVLSSK KEDAAKFDEI LVKSNTGHGI SDASSH

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits