YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30261659, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	505 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30261659, gi|....

Description	E-value	Query Range	Subject Range
gi\|49332536, gi\|... - gi\|49480980\|ref\|YP_035777.1\| thermostable carboxypeptidase 1 [Bacillus thuringiensis serovar konkuki...	0.0	[1..505]	[1..505]
gi\|52143787, gi\|... - gi\|52143787\|ref\|YP_083041.1\| thermostable carboxypeptidase 1 [Bacillus cereus E33L], gi\|51977256\|gb\|...	0.0	[1..505]	[1..505]
gi\|42736687, gi\|... - gi\|42780767\|ref\|NP_978014.1\| thermostable carboxypeptidase 1 [Bacillus cereus ATCC 10987], gi\|427366...	0.0	[1..505]	[1..505]
gi\|47556945, gi\|... - gi\|47566028\|ref\|ZP_00237066.1\| thermostable carboxypeptidase 1 [Bacillus cereus G9241], gi\|47556945\|...	0.0	[1..505]	[1..505]
gi\|228795071, gi... - gi\|228964640\|ref\|ZP_04125748.1\| metalloprotease [Bacillus thuringiensis serovar sotto str. T04001], ... gi\|228859412, gi... - gi\|228900243\|ref\|ZP_04064474.1\| metalloprotease [Bacillus thuringiensis IBL 4222], gi\|228859412\|gb\|E... gi\|75761718, gi\|... - gi\|75761718\|ref\|ZP_00741660.1\| Thermostable carboxypeptidase 1 [Bacillus thuringiensis serovar israe...	0.0	[1..505]	[18..522]
gi\|29895257, gi\|... - gi\|30019713\|ref\|NP_831344.1\| thermostable carboxypeptidase 1 [Bacillus cereus ATCC 14579], gi\|298952...	0.0	[1..505]	[1..505]
gi\|229132473, gi... - gi\|229132473\|ref\|ZP_04261324.1\| metalloprotease [Bacillus cereus BDRD-ST196], gi\|228650969\|gb\|EEL069... gi\|89204901, gi\|... - gi\|89204901\|ref\|ZP_01183476.1\| Thermostable carboxypeptidase 1 [Bacillus weihenstephanensis KBAB4], ...	0.0	[1..505]	[1..505]
YPWA_BACSU - Putative metalloprotease ypwA OS=Bacillus subtilis GN=ypwA PE=1 SV=1 gi\|221323644 - gi\|221323644\|ref\|ZP_03604938.1\| hypothetical protein BsubsS_12132 [Bacillus subtilis subsp. subtilis... gi\|221319368 - gi\|221319368\|ref\|ZP_03600662.1\| hypothetical protein BsubsJ_12003 [Bacillus subtilis subsp. subtilis... CBP1_BACSU - Carboxypeptidase 1 OS=Bacillus subtilis (strain 168) GN=ypwA PE=1 SV=1 gi\|221314446 - gi\|221314446\|ref\|ZP_03596251.1\| hypothetical protein BsubsN3_12077 [Bacillus subtilis subsp. subtili...	0.0	[1..505]	[1..501]
gi\|89099848, gi\|... - gi\|89099848\|ref\|ZP_01172720.1\| thermostable carboxypeptidase 1 [Bacillus sp. NRRL B-14911], gi\|89085...	0.0	[7..505]	[7..505]
gi\|152023853, gi... - gi\|89201035\|ref\|ZP_01179783.1\| Thermostable carboxypeptidase 1 [Bacillus cereus subsp. cytotoxis NVH...	0.0	[1..505]	[1..505]

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Predicted Domain #1

Region A:
Residues: [1-505]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVATYEVEK QFLTYVKKIQ NYGEALSLMF WDLRTGAPKK GVDQRSEVIG MLSSEVFAMS  60
   61 TSDEMGNYLT ELEALISEDK LSETTKKMVE ECRKEYDRNK KIPQAEYEAY VKLEAKAESV 120
  121 WEEAREKSDF EMFRPYLEQI VEFKKKFITY WGYETYKYNT LLDMYEPGIT VEVLDHVFGQ 180
  181 LRERIVPLVK EISESQKRLK TSALSEHFSK EKQKNFTLEL LKQLNYDFEA GRLDETVHPF 240
  241 EITLNRGDVR ITTRYDEKDF RMAVFGTIHE CGHAVYEQNI AEKFEGTPLC SGTSMGIHES 300
  301 QSLFFENFIG RNKSFWKKNY DLLKEYSDGQ FNDISVDEFY DAINESKPSF IRIEADELTY 360
  361 PLHVMVRYEL EKELFDGTLQ VKDLPAAWND KMEAYLGIRP ANDAQGVLQD VHWAGGSFGY 420
  421 FPSYALGYMY AAQFKQRMVK DIPNFDALLE EGNVTPIREW LTENIHQYGK TKKPLEILED 480
  481 VTGEGLNANY LADYLEAKYR EIYEL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	161.0
Match:	1wgzA
Description:	Crystal structure of carboxypeptidase 1 from Thermus thermophilus
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits