YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30255429, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	204 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30255429, gi|....

Description	E-value	Query Range	Subject Range
gi\|29895172, gi\|... - gi\|30019628\|ref\|NP_831259.1\| cell wall endopeptidase [Bacillus cereus ATCC 14579], gi\|29895172\|gb\|AA...	9.0E-51	[1..204]	[1..204]
gi\|42736598, gi\|... - gi\|42780678\|ref\|NP_977925.1\| M24/M37 family peptidase [Bacillus cereus ATCC 10987], gi\|42736598\|gb\|A...	4.0E-49	[1..204]	[1..204]
gi\|222095209, gi... - gi\|222095209\|ref\|YP_002529269.1\| cell wall endopeptidase, family M23/M37 [Bacillus cereus Q1], gi\|22... gi\|217959055, gi... - gi\|217959055\|ref\|YP_002337603.1\| peptidase, M23/M37 family [Bacillus cereus AH187], gi\|217068072\|gb\|... gi\|196038964, gi... - gi\|196038964\|ref\|ZP_03106271.1\| peptidase, M23/M37 family [Bacillus cereus NVH0597-99], gi\|196030109... gi\|196036842, gi... - gi\|196036842\|ref\|ZP_03104231.1\| peptidase, M23/M37 family [Bacillus cereus W], gi\|195990571\|gb\|EDX54... gi\|49332604, gi\|... - gi\|49481048\|ref\|YP_035696.1\| cell wall endopeptidase [Bacillus thuringiensis serovar konkukian str. ... gi\|52143866, gi\|... - gi\|52143866\|ref\|YP_082960.1\| cell wall endopeptidase [Bacillus cereus E33L], gi\|51977335\|gb\|AAU18885...	5.0E-49	[1..204]	[1..204]
gi\|47569152, gi\|... - gi\|47569152\|ref\|ZP_00239840.1\| cell wall endopeptidase, family M23/M37 [Bacillus cereus G9241], gi\|4...	2.0E-48	[1..204]	[1..204]
gi\|25489938 - pir\|\|H83849 hypothetical protein BH1600 [imported] - Bacillus halodurans (strain C-125) gi\|10174217, gi\|... - gi\|15614163\|ref\|NP_242466.1\| hypothetical protein BH1600 [Bacillus halodurans C-125], gi\|10174217\|db...	1.0E-37	[1..203]	[5..253]
gi\|52348690, gi\|... - gi\|52786188\|ref\|YP_092017.1\| hypothetical protein BLi02447 [Bacillus licheniformis ATCC 14580], gi\|5...	1.0E-33	[1..203]	[1..219]
gi\|20809035 - gi\|20809035\|ref\|NP_624206.1\| Membrane proteins related to metalloendopeptidase [Thermoanaerobacter t... gi\|20809035, gi\|... - gi\|20809035\|ref\|NP_624206.1\| membrane proteins related to metalloendopeptidase [Thermoanaerobacter t...	8.0E-33	[10..143]	[311..447]
gi\|22295881, gi\|... - gi\|22299697\|ref\|NP_682944.1\| putative peptidase [Thermosynechococcus elongatus BP-1], gi\|22295881\|db...	2.0E-32	[2..143]	[271..414]
gi\|167040956, gi... - gi\|167040956\|ref\|YP_001663941.1\| peptidase M23B [Thermoanaerobacter sp. X514], gi\|166855196\|gb\|ABY93... gi\|242231787, gi... - gi\|242256714\|ref\|ZP_04801600.1\| Peptidase M23 [Thermoanaerobacter sp. X513], gi\|242231787\|gb\|EES3411... gi\|167036532, gi... - gi\|76795644\|ref\|ZP_00778016.1\| Peptidoglycan-binding LysM:Peptidase M23B:G5 [Thermoanaerobacter eth... gi\|241904471, gi... - gi\|241904471\|ref\|ZP_04789165.1\| Peptidase M23 [Thermoanaerobacter brockii subsp. finnii Ako-1], gi\|2...	2.0E-32	[24..144]	[328..450]
gi\|98978292, gi\|... - gi\|98978292\|gb\|ABF54443.1\| peptidase M23B [Sphingopyxis alaskensis RB2256], gi\|68540343\|ref\|ZP_00580...	7.0E-32	[16..139]	[330..461]

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Predicted Domain #1

Region A:
Residues: [1-149]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLKCGVML LSILFVSQLH VYAEENRWTW PVEGQISDYF GTRHGKHYGI DVAAPIGTPV  60
   61 VAIQDGKVTR SYYSSSYGNV VFIKHGEYEA VYAHLNKRYV NQGDYISKGE KIGEVGNTGE 120
  121 SRGAHLHLEL HQGRWTMAKK NAMNPLLVL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.69897
Match:	2gu1A
Description:	No description for 2gu1A was found.

Predicted Domain #2

Region A:
Residues: [150-204]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEQRNEVVSS SLYVVQKGDT LVSIARKFSM TLKEIKEKNG LQQELIYPNQ QLYVK

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	2.8
Match:	2djpA
Description:	No description for 2djpA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits