YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30255428, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	193 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30255428, gi|....

Description	E-value	Query Range	Subject Range
gi\|42736597, gi\|... - gi\|42780677\|ref\|NP_977924.1\| ATP:cob(I)alamin adenosyltransferase, putative [Bacillus cereus ATCC 10...	1.0E-76	[1..193]	[1..193]
gi\|52143869, gi\|... - gi\|52143869\|ref\|YP_082959.1\| hypothetical protein BCZK1360 [Bacillus cereus E33L], gi\|51977338\|gb\|AA...	6.0E-76	[1..193]	[1..193]
gi\|29895171, gi\|... - gi\|30019627\|ref\|NP_831258.1\| putative cytoplasmic protein [Bacillus cereus ATCC 14579], gi\|29895171\|... gi\|229144177, gi... - gi\|229144177\|ref\|ZP_04272591.1\| ATP:cob(I)alamin adenosyltransferase [Bacillus cereus BDRD-ST24], gi... gi\|229126892, gi... - gi\|229126892\|ref\|ZP_04255904.1\| ATP:cob(I)alamin adenosyltransferase [Bacillus cereus BDRD-Cer4], gi...	2.0E-75	[1..193]	[1..193]
gi\|49481049, gi\|... - gi\|49481049\|ref\|YP_035695.1\| hypothetical protein BT9727_1361 [Bacillus thuringiensis serovar konkuk...	5.0E-75	[1..193]	[1..193]
gi\|47569151, gi\|... - gi\|47569151\|ref\|ZP_00239839.1\| ATP:cob(I)alamin adenosyltransferase, putative [Bacillus cereus G9241...	4.0E-74	[1..188]	[1..188]
gi\|56420792, gi\|... - gi\|56420792\|ref\|YP_148110.1\| hypothetical protein GK2257 [Geobacillus kaustophilus HTA426], gi\|56380... gi\|220708878, gi... - gi\|221087228\|ref\|ZP_03556767.1\| ATP/cobalamin adenosyltransferase [Geobacillus sp. Y412MC61], gi\|220... gi\|229497638, gi... - gi\|229497638\|ref\|ZP_04391338.1\| ATP/cobalamin adenosyltransferase [Geobacillus sp. Y412MC52], gi\|229...	5.0E-73	[1..191]	[1..192]
gi\|16080368, gi\|... - gi\|2635812\|emb\|CAB15305.1\| yvqK [Bacillus subtilis subsp. subtilis str. 168], gi\|16080368\|ref\|NP_391... gi\|2832814, gi\|8... - gi\|81342430\|sp\|O34899.1\|PDUO_BACSU RecName: Full=Cob(I)yrinic acid a,c-diamide adenosyltransferase; ...	8.0E-72	[1..191]	[1..192]
gi\|40889716, gi\|... - gi\|40889718\|pdb\|1RTY\|C Chain C, Crystal Structure Of Bacillus Subtilis Yvqk, A Putative Atp- Binding...	2.0E-70	[2..191]	[2..192]
gi\|15614158, gi\|... - gi\|15614158\|ref\|NP_242461.1\| hypothetical protein BH1595 [Bacillus halodurans C-125], gi\|10174212\|db... gi\|25345914 - pir\|\|C83849 hypothetical protein BH1595 [imported] - Bacillus halodurans (strain C-125)	1.0E-69	[1..191]	[1..193]
gi\|17986376, gi\|... - gi\|17986376\|ref\|NP_539010.1\| adenosylcobalamin-dependent diol dehydratase gamma subunit [Brucella me... gi\|25345923 - pir\|\|AG3263 propanediol dehydratase (EC 4.2.1.28) [imported] - Brucella melitensis (strain 16M)	1.0E-69	[2..193]	[20..219]

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Predicted Domain #1

Region A:
Residues: [1-193]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLYTKTGDK GTTSVIGGRV DKDDIRVEAY GTIDEANSHI GYAMTKLQGG AFIDIYNELE  60
   61 NIQHELFDCG GDLAIVEQKI PYKVTIEMVE SLERKIDLYI EEAPPLERFI LPGGSEAAAT 120
  121 IHIARTVVRR AERSIVSLQK EVKINEVVLK YVNRLSDYLF AIARVINARL QVKDVEYNRS 180
  181 ALVFRDKKEK EVE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	73.221849
Match:	1rtyA
Description:	Crystal Structure of Bacillus subtilis YvqK, a putative ATP-binding Cobalamin Adenosyltransferase, The North East Structural Genomics Target SR128
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
cob(I)yrinic acid a,c-diamide adenosyltransferase activity	4.95087882682001	bayes_pls_golite062009
catalytic activity	0.979455580512895	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: