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View Structure Prediction Details

Protein: gi|49184367, gi|...
Organism: Bacillus anthracis str. Sterne
Length: 451 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49184367, gi|....

Description E-value Query
Range
Subject
Range
gi|29895134, gi|... - gi|30019590|ref|NP_831221.1| branched chain amino acid ABC transporter carrier protein [Bacillus cer...
0.0 [1..451] [13..463]
gi|49477236, gi|... - gi|49477236|ref|YP_035658.1| branched-chain amino acid transport protein [Bacillus thuringiensis ser...
0.0 [1..451] [1..451]
gi|47554180, gi|... - gi|47569109|ref|ZP_00239797.1| branched-chain amino acid transport system II carrier protein [Bacill...
0.0 [1..451] [1..451]
gi|51977376, gi|... - gi|52143907|ref|YP_082922.1| branched-chain amino acid transport protein [Bacillus cereus E33L], gi|...
gi|228926571, gi... - gi|228926571|ref|ZP_04089642.1| Branched-chain amino acid transport protein [Bacillus thuringiensis ...
0.0 [1..451] [1..451]
gi|152023716, gi... - gi|89202929|ref|ZP_01181633.1| Branched-chain amino acid transport system II carrier protein [Bacill...
0.0 [1..451] [1..451]
gi|42780639, gi|... - gi|42780639|ref|NP_977886.1| branched-chain amino acid transport system II carrier protein [Bacillus...
0.0 [1..451] [1..451]
gi|75762736, gi|... - gi|75762736|ref|ZP_00742568.1| Branched chain amino acid transport system II carrier protein [Bacill...
0.0 [1..432] [3..438]
gi|89153322, gi|... - gi|89208760|ref|ZP_01187249.1| Branched-chain amino acid transport system II carrier protein [Bacill...
0.0 [1..432] [3..438]

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Predicted Domain #1
Region A:
Residues: [1-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTVSKKHIF FTGLMLFSLF FGAGNLIFPP MLGQNAGENF WPAMIGFLLT GVGLPLLTVI  60
   61 AISLSGNGMQ QLASHVHPLF GIFFTVVVYI AIGPSMGIPR VANVAYEMGV SSFLPETIRS 120
  121 SSLVLFVYTI IFFAIVFWLS LNPSKLVDRI GNILTPILLL SIFLLFVKSV FTPLGQSGPA 180
  181 MQEYQTFPIF KGFMEGYLTM DTISALAFGI IVVNAIRSKG VNDRKSIAIA TAKAGLIAAT 240
  241 GLVLVYGALG WLGTTSVSLG YAKNGGQLLT VIVQQLFGPY GLLLLALIVT LACLTTCVGL 300
  301 VSACSQYFST LLTKFSYKTF ASIICALGLL VANLGLTKII AISVPILLVV YPIAIVLVLL 360
  361 SLLHKYFGGY 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.07
Match: 2a65A
Description: Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [371-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSVYVGALIG AAIVSVFDGL KQGGISVSFI TSYFEFIPLY NEGIGWLVPA LTGALIGLTI  60
   61 AKLSGAKKVP LLTESREVKA S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle