YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|49184344, gi\|...
Organism:	Bacillus anthracis str. Sterne
Length:	628 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49184344, gi|....

Description	E-value	Query Range	Subject Range
gi\|221240495, gi... - gi\|222096437\|ref\|YP_002530494.1\| sulfatase [Bacillus cereus Q1], gi\|221240495\|gb\|ACM13205.1\| sulfata... gi\|42782043, gi\|... - gi\|42782043\|ref\|NP_979290.1\| sulfatase [Bacillus cereus ATCC 10987], gi\|42737967\|gb\|AAS41898.1\| sulf...	0.0	[5..625]	[12..635]
gi\|228844183, gi... - gi\|228915536\|ref\|ZP_04079125.1\| Processed glycerol phosphate lipoteichoic acid synthase 2 [Bacillus ... gi\|65320220 - gi\|65320220\|ref\|ZP_00393179.1\| COG1368: Phosphoglycerol transferase and related proteins, alkaline p... gi\|228946549, gi... - gi\|228946549\|ref\|ZP_04108864.1\| Processed glycerol phosphate lipoteichoic acid synthase 2 [Bacillus ... gi\|228831679, gi... - gi\|228927989\|ref\|ZP_04091034.1\| Processed glycerol phosphate lipoteichoic acid synthase 2 [Bacillus ... gi\|229122485, gi... - gi\|229122485\|ref\|ZP_04251698.1\| Processed glycerol phosphate lipoteichoic acid synthase 2 [Bacillus ... gi\|229091943, gi... - gi\|229091943\|ref\|ZP_04223131.1\| Processed glycerol phosphate lipoteichoic acid synthase 2 [Bacillus ...	0.0	[5..625]	[19..642]
gi\|47568753, gi\|... - gi\|47568753\|ref\|ZP_00239448.1\| phosphoglycerol transferase [Bacillus cereus G9241], gi\|47554533\|gb\|E...	0.0	[5..625]	[12..635]
gi\|227814249, gi... - gi\|227814249\|ref\|YP_002814258.1\| sulfatase [Bacillus anthracis str. CDC 684], gi\|227004603\|gb\|ACP143... gi\|49185743, gi\|... - gi\|49185743\|ref\|YP_028995.1\| sulfatase [Bacillus anthracis str. Sterne], gi\|49179670\|gb\|AAT55046.1\| ... gi\|47528239, gi\|... - gi\|47528239\|ref\|YP_019588.1\| sulfatase [Bacillus anthracis str. 'Ames Ancestor'], gi\|47503387\|gb\|AAT... gi\|21400829 - ref\|NP_656814.1\| Sulfatase, Sulfatase [Bacillus anthracis str. A2012] gi\|254752274 - gi\|254752274\|ref\|ZP_05204311.1\| sulfatase [Bacillus anthracis str. Vollum] gi\|254737959 - gi\|254737959\|ref\|ZP_05195662.1\| sulfatase [Bacillus anthracis str. Western North America USA6153] gi\|254685503 - gi\|254685503\|ref\|ZP_05149363.1\| sulfatase [Bacillus anthracis str. CNEVA-9066] gi\|229264740, gi... - gi\|229600332\|ref\|YP_002867196.1\| arylsulfatase [Bacillus anthracis str. A0248], gi\|229264740\|gb\|ACQ4... gi\|254760791 - gi\|254760791\|ref\|ZP_05212815.1\| sulfatase [Bacillus anthracis str. Australia 94] gi\|218904062, gi... - gi\|218904062\|ref\|YP_002451896.1\| sulfatase [Bacillus cereus AH820], gi\|218539206\|gb\|ACK91604.1\| sulf... gi\|196042223, gi... - gi\|196042223\|ref\|ZP_03109504.1\| sulfatase [Bacillus cereus NVH0597-99], gi\|196026941\|gb\|EDX65567.1\| ... gi\|196032397, gi... - gi\|196032397\|ref\|ZP_03099811.1\| sulfatase [Bacillus cereus W], gi\|195995148\|gb\|EDX59102.1\| sulfatase... gi\|190564099, gi... - gi\|190564782\|ref\|ZP_03017703.1\| sulfatase [Bacillus anthracis Tsiankovskii-I], gi\|190564099\|gb\|EDV18... gi\|172084705, gi... - gi\|177649631\|ref\|ZP_02932633.1\| sulfatase [Bacillus anthracis str. A0174], gi\|172084705\|gb\|EDT69763.... gi\|170130279, gi... - gi\|170704478\|ref\|ZP_02894944.1\| sulfatase [Bacillus anthracis str. A0389], gi\|170130279\|gb\|EDS99140.... gi\|170685466, gi... - gi\|170685466\|ref\|ZP_02876690.1\| sulfatase [Bacillus anthracis str. A0465], gi\|170670826\|gb\|EDT21565.... gi\|167514428, gi... - gi\|167637879\|ref\|ZP_02396158.1\| sulfatase [Bacillus anthracis str. A0193], gi\|167514428\|gb\|EDR89795.... gi\|164715830, gi... - gi\|165869104\|ref\|ZP_02213764.1\| sulfatase [Bacillus anthracis str. A0488], gi\|164715830\|gb\|EDR21347....	0.0	[5..625]	[12..635]
gi\|49330613, gi\|... - gi\|49479057\|ref\|YP_037012.1\| phosphoglycerol transferase [Bacillus thuringiensis serovar konkukian s...	0.0	[5..625]	[12..635]
gi\|51976045, gi\|... - gi\|52142576\|ref\|YP_084253.1\| phosphoglycerol transferase [Bacillus cereus E33L], gi\|51976045\|gb\|AAU1...	0.0	[5..625]	[12..635]
gi\|30257539, gi\|... - gi\|30262906\|ref\|NP_845283.1\| sulfatase [Bacillus anthracis str. Ames], gi\|30257539\|gb\|AAP26769.1\| su...	0.0	[5..625]	[12..635]
gi\|7445526, gi\|2... - pir\|\|D69815 conserved hypothetical protein yfnI - Bacillus subtilis, gi\|2116767\|dbj\|BAA20118.1\| Yfn... gi\|221317812 - gi\|221317812\|ref\|ZP_03599106.1\| hypothetical protein BsubsJ_03983 [Bacillus subtilis subsp. subtilis... gi\|221312888 - gi\|221312888\|ref\|ZP_03594693.1\| hypothetical protein BsubsN3_04029 [Bacillus subtilis subsp. subtili... gi\|221322086 - gi\|221322086\|ref\|ZP_03603380.1\| hypothetical protein BsubsS_04074 [Bacillus subtilis subsp. subtilis... gi\|221308563 - gi\|221308563\|ref\|ZP_03590410.1\| hypothetical protein Bsubs1_04073 [Bacillus subtilis subsp. subtilis...	0.0	[1..624]	[15..642]
LTAS1_BACSU - Lipoteichoic acid synthase 1 OS=Bacillus subtilis GN=ltaS1 PE=1 SV=1 LTAS1_BACSU - Lipoteichoic acid synthase 1 OS=Bacillus subtilis (strain 168) GN=ltaS1 PE=1 SV=1	0.0	[1..624]	[1..628]
gi\|52005651, gi\|... - gi\|52787836\|ref\|YP_093665.1\| YfnI [Bacillus licheniformis ATCC 14580], gi\|52350338\|gb\|AAU42972.1\| Yf...	0.0	[1..625]	[1..629]

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Predicted Domain #1

Region A:
Residues: [1-220]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQRLFPKLR FALVAVVLLW IKTYIVYKLA FDIKIDNFFE EFMLFMNPLA ALLLFFGFAL  60
   61 FASKHRNRII VGISFILSFI LFGNAMFYGF YNDFVTFPVL FQTNNMADLG TSIKELFTYK 120
  121 TLLLFADAII LMFLSRKFPA FCDKTPLSRS EKRTFFSSVT ALLALQIVVS VIYKPQMFSR 180
  181 SFDRQTVVKN LGLYTYHLFD ITLQSKSSAE RVFASGDGFS

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [221-628]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EIKNYTDSKD KQVDKNLFGA AKGKNVILIS MESTQSFVIN KKINGKEITP FLNEFIKDSF  60
   61 YFDNFYHQTG QGKTSDAEFI VENSLYPLDR GSVFFTHATN EYTATPEQLK KYGYSSAVFH 120
  121 SNDKAFWNRD VMYPALGYDR YFNLNDYVGT EQMSVGWGLK DKEFFEQSIP KLKSLPQPFY 180
  181 TKFITLTNHF PFLLNPEDQY VDEFNSESGV VNRYFPTVRY TDEALKQFIK QLKAEGLYDN 240
  241 SVIVIYGDHY GISENHNAAM AQFLGKDAIT PFDSMQLQRV PLIIHVPGQE GKVISKVSGQ 300
  301 IDIKPTLLHL LGIKTNKSVE FGTDLFIKEE DPLMVMRDGS FVSEDYVYTK NMCYKRSTGE 360
  361 EADISLCQPN IEKAKTELKL SDKLIYGDLL RFDPTNQYKT GTMTTKFE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	46.0
Match:	2qzuA
Description:	No description for 2qzuA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits