YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30255365, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	338 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30255365, gi|....

Description	E-value	Query Range	Subject Range
gi\|52143930, gi\|... - gi\|52143930\|ref\|YP_082897.1\| histidinol-phosphatase [Bacillus cereus E33L], gi\|51977399\|gb\|AAU18949....	6.0E-82	[1..338]	[1..338]
gi\|47556856, gi\|... - gi\|47566303\|ref\|ZP_00237331.1\| histidinol-phosphatase [Bacillus cereus G9241], gi\|47556856\|gb\|EAL151...	8.0E-82	[1..338]	[1..338]
gi\|42780607, gi\|... - gi\|42780607\|ref\|NP_977854.1\| histidinol-phosphatase [Bacillus cereus ATCC 10987], gi\|42736527\|gb\|AAS...	1.0E-81	[1..338]	[1..338]
gi\|49328779, gi\|... - gi\|49477223\|ref\|YP_035631.1\| histidinol-phosphatase [Bacillus thuringiensis serovar konkukian str. 9...	2.0E-80	[1..338]	[1..339]
gi\|229166354, gi... - gi\|229166354\|ref\|ZP_04294111.1\| Histidinol-phosphatase [Bacillus cereus AH621], gi\|228617096\|gb\|EEK7... gi\|89154246, gi\|... - gi\|89207821\|ref\|ZP_01186352.1\| Histidinol phosphate phosphatase, HisJ [Bacillus weihenstephanensis K...	1.0E-76	[1..338]	[1..339]
gi\|75759743, gi\|... - gi\|75759743\|ref\|ZP_00739823.1\| Histidinol-phosphatase [Bacillus thuringiensis serovar israelensis AT...	2.0E-76	[1..338]	[3..340]
gi\|30019562, gi\|... - gi\|30019562\|ref\|NP_831193.1\| histidinol-phosphatase [Bacillus cereus ATCC 14579], gi\|29895106\|gb\|AAP...	3.0E-64	[49..338]	[1..291]
gi\|229268118, gi... - gi\|229603710\|ref\|YP_002868831.1\| PHP domain protein [Bacillus anthracis str. A0248], gi\|229268118\|gb... gi\|164712825, gi... - gi\|165871528\|ref\|ZP_02216175.1\| PHP domain protein [Bacillus anthracis str. A0488], gi\|164712825\|gb\|... gi\|227817335, gi... - gi\|227817335\|ref\|YP_002817344.1\| PHP domain protein [Bacillus anthracis str. CDC 684], gi\|227004335\|... gi\|65321919 - gi\|65321919\|ref\|ZP_00394878.1\| COG1796: DNA polymerase IV (family X) [Bacillus anthracis str. A2012] gi\|170708721, gi... - gi\|170708721\|ref\|ZP_02899159.1\| PHP domain protein [Bacillus anthracis str. A0389], gi\|170126401\|gb\|... gi\|172081676, gi... - gi\|177653152\|ref\|ZP_02935439.1\| PHP domain protein [Bacillus anthracis str. A0174], gi\|172081676\|gb\|... gi\|167635563, gi... - gi\|167635563\|ref\|ZP_02393875.1\| PHP domain protein [Bacillus anthracis str. A0442], gi\|167528983\|gb\|... gi\|170667731, gi... - gi\|170688225\|ref\|ZP_02879435.1\| PHP domain protein [Bacillus anthracis str. A0465], gi\|170667731\|gb\|... gi\|190567066, gi... - gi\|190567066\|ref\|ZP_03019982.1\| PHP domain protein [Bacillus anthracis Tsiankovskii-I], gi\|190562057...	1.0E-53	[14..338]	[306..573]

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Predicted Domain #1

Region A:
Residues: [1-338]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVDYHIHLE EGPYSIGWLA KINEALQHYE PLKEAKHSME WLVKTQERLQ RRVKEGPFTT  60
   61 KWIDLYLEEA VRKGIKEVGI VDHLYRFYEA KEYYERYVDI SDSRLGRLQK EWLDQVRVAS 120
  121 LHDFTKAIEE AKERWSKRGV TLKLGIEADY FIGGEQELQS LLALGDFDYV IGSVHFLNGW 180
  181 GFDNPDMKEY FREHDLYALY DTFFKTVECA VRSELFDIIA HLDNIKVFNY RLDENEQLSY 240
  241 YKEIARALVE TNTATEINAG LYYRYPVREM CPSPLYLQVL AKHEVPITLS SDAHYPNDLG 300
  301 KYVEENVKTL RNHNISHLAT FTKRVRTMRL LEEVTISK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	33.045757
Match:	1m65A
Description:	Hypothetical protein YcdX
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits