YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30254850, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	223 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30254850, gi|....

Description	E-value	Query Range	Subject Range
gi\|65318506 - gi\|65318506\|ref\|ZP_00391465.1\| hypothetical protein Bant_01001757 [Bacillus anthracis str. A2012]	2.0E-61	[1..223]	[1..223]
gi\|42780300, gi\|... - gi\|42780300\|ref\|NP_977547.1\| S-layer protein, putative [Bacillus cereus ATCC 10987], gi\|42736219\|gb\|...	2.0E-61	[1..223]	[1..223]
gi\|47555781, gi\|... - gi\|47567586\|ref\|ZP_00238297.1\| S-layer homology domain [Bacillus cereus G9241], gi\|47555781\|gb\|EAL14...	5.0E-61	[1..223]	[1..223]
gi\|51977671, gi\|... - gi\|52144202\|ref\|YP_082627.1\| S-layer protein [Bacillus cereus E33L], gi\|51977671\|gb\|AAU19221.1\| S-la...	2.0E-59	[1..223]	[1..223]
gi\|29894824, gi\|... - gi\|30019281\|ref\|NP_830912.1\| S-layer-like domain-containing protein [Bacillus cereus ATCC 14579], gi...	3.0E-57	[5..215]	[4..213]
gi\|49180356, gi\|... - gi\|49186429\|ref\|YP_029681.1\| S-layer protein, putative [Bacillus anthracis str. Sterne], gi\|49180356... gi\|47551901, gi\|... - gi\|47778196\|ref\|YP_020328.2\| s-layer protein, putative [Bacillus anthracis str. 'Ames Ancestor'], gi... gi\|30263581, gi\|... - gi\|30263581\|ref\|NP_845958.1\| S-layer protein, putative [Bacillus anthracis str. Ames], gi\|30258216\|g...	1.0E-56	[2..223]	[17..238]
gi\|49478302, gi\|... - gi\|49478302\|ref\|YP_037708.1\| S-layer protein [Bacillus thuringiensis serovar konkukian str. 97-27], ...	1.0E-56	[2..223]	[17..238]

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Predicted Domain #1

Region A:
Residues: [1-223]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREMKKLVKI ATSLTLMGGI FVSANGVSAN TDVTQKSSPN IMIEFDDVTT DHWAYDEITN  60
   61 LVYHRIMYGY GNGKFGTEDN ITREQAAAVL HRALGLKRSV FDANPYGDIS GKSTMFPYEI 120
  121 LHLTNLGIFK GDENGNFRPK DTLTRAELAQ ILTKAYELKA KSPHTFTDIP EKHWARDAIS 180
  181 ALQSNKVAVG TGDGKFEPEM LVTRGQFAKF LQRSIDNSPG KME

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits