YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30261170, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	247 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30261170, gi|....

Description	E-value	Query Range	Subject Range
gi\|119720457, gi... - gi\|119720457\|ref\|YP_920952.1\| spermidine/putrescine ABC transporter ATPase subunit [Thermofilum pend...	2.0E-90	[3..245]	[2..241]
gi\|221236171, gi... - gi\|221236171\|ref\|YP_002518608.1\| spermidine/putrescine transport ATP-binding protein potA [Caulobact... gi\|25384753 - pir\|\|D87637 hypothetical protein CC3134 [imported] - Caulobacter crescentus gi\|16127364, gi\|... - gi\|16127364\|ref\|NP_421928.1\| spermidine/putrescine ABC transporter, ATP-binding protein [Caulobacter...	5.0E-90	[3..242]	[13..249]
gi\|113726386, gi... - gi\|150395538\|ref\|YP_001326005.1\| spermidine/putrescine ABC transporter ATPase subunit [Sinorhizobium...	2.0E-89	[3..245]	[21..260]
gi\|15073645 - gi\|15073645\|emb\|CAC45287.1\| Probable putrescine transport ATP-binding protein [Sinorhizobium melilot... gi\|15964468 - gi\|15964468\|ref\|NP_384821.1\| putrescine ABC transporter ATP-binding protein [Sinorhizobium meliloti ...	2.0E-89	[3..245]	[22..261]
gi\|83586168 - gi\|83586168\|ref\|ZP_00924805.1\| COG3842: ABC-type spermidine/putrescine transport systems, ATPase com...	2.0E-88	[2..242]	[44..281]
gi\|75236088 - gi\|75236088\|ref\|ZP_00720212.1\| COG3842: ABC-type spermidine/putrescine transport systems, ATPase com...	2.0E-88	[2..242]	[44..281]
gi\|237707181, gi... - gi\|237707181\|ref\|ZP_04537662.1\| putrescine transporter ATP-binding subunit [Escherichia sp. 3_2_53FA... gi\|91071463, gi\|... - gi\|91209889\|ref\|YP_539875.1\| putrescine transport ATP-binding protein PotG [Escherichia coli UTI89],... gi\|117623035, gi... - gi\|117623035\|ref\|YP_851948.1\| putrescine transporter ATP-binding subunit [Escherichia coli APEC O1],...	2.0E-88	[2..242]	[44..281]
gi\|51855298, gi\|... - gi\|51891609\|ref\|YP_074300.1\| spermidine/putrescine ABC transporter ATP-binding protein [Symbiobacter...	2.0E-88	[4..247]	[1..241]
gi\|75240919 - gi\|75240919\|ref\|ZP_00724808.1\| COG3842: ABC-type spermidine/putrescine transport systems, ATPase com... gi\|227884181, gi... - gi\|227884181\|ref\|ZP_04001986.1\| polyamine ABC superfamily ATP binding cassette transporter ATPase [E...	2.0E-88	[2..242]	[44..281]
gi\|147335, gi\|321862 - pir\|\|B45313 putrescine transport protein potG - Escherichia coli (strain K-12), gi\|147335\|gb\|AAA244... gi\|1651388, gi\|1... - gi\|49176053\|ref\|NP_415376.3\| ATP-binding component of putrescine transport system [Escherichia coli ...	2.0E-88	[2..242]	[44..281]

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Predicted Domain #1

Region A:
Residues: [1-247]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELLRVENV TGGYTKRPVL KDVSFSVNKG ELVGLIGLNG AGKSTTIKHI IGLMEPKKGT  60
   61 VTINGKTIRD DMTAYRSSFS FIPETPVLYD ELTLEEHLKL TAMAYGVDEK QYEERVGQLL 120
  121 QEFRMKNRLK WFPSHFSKGM KQKVMIMSAF LVEPSLYIVD EPFVGLDPLA IQSLLQMMDQ 180
  181 MKKSGAGILM STHILATAER YCDSFIILHQ GEVRAKGTLS ELQLQFNMPG ATLDDIYIAL 240
  241 TKEEDYE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	86.0
Match:	2d62A
Description:	No description for 2d62A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits