YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30261087, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	177 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30261087, gi|....

Description	E-value	Query Range	Subject Range
gi\|74490681, gi\|... - gi\|75761825\|ref\|ZP_00741756.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Bacillus thurin...	2.0E-33	[1..177]	[21..197]
gi\|29894674, gi\|... - gi\|30019131\|ref\|NP_830762.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Bacillus cereus A...	7.0E-33	[1..177]	[21..197]
gi\|65318367 - gi\|65318367\|ref\|ZP_00391326.1\| COG1183: Phosphatidylserine synthase [Bacillus anthracis str. A2012]	2.0E-32	[1..177]	[18..194]
gi\|52144363, gi\|... - gi\|52144363\|ref\|YP_082466.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Bacillus cereus E...	2.0E-31	[1..177]	[1..177]
gi\|163861052, gi... - gi\|89205373\|ref\|ZP_01183943.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Bacillus weihen...	3.0E-31	[1..177]	[1..177]
gi\|42736040, gi\|... - gi\|42780122\|ref\|NP_977369.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Bacillus cereus A...	4.0E-31	[1..177]	[1..177]
gi\|47558297, gi\|... - gi\|47564924\|ref\|ZP_00235968.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Bacillus cereus...	1.0E-29	[1..177]	[1..177]
gi\|88698686, gi\|... - gi\|88707036\|ref\|ZP_01104732.1\| CDP-alcohol phosphatidyltransferase family protein [gamma proteobacte...	1.0E-29	[2..164]	[84..261]
gi\|49331756, gi\|... - gi\|49480200\|ref\|YP_035221.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Bacillus thuringi...	4.0E-29	[1..177]	[1..177]
gi\|48845999, gi\|... - gi\|78222478\|ref\|YP_384225.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Geobacter metalli...	1.0E-28	[1..166]	[16..192]

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Predicted Domain #1

Region A:
Residues: [1-177]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYIPNMITI ANFVCGLLAI HAVFVHDMYG AVMFIITGMV FDLFDGMVAR KLDSVSEIGG  60
   61 ELDSFADLVT FGVAPSILAY SVALKDLQSI GMLCALAYSV CGMLRLARFN TQQSKLPTFI 120
  121 GMPIPFAAIC LLILCLLNNP VSVAFGTCIL AYLMVSKIKF PHFKKDISES LKSERWD

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	26.259637
Match:	PF01066.12
Description:	No description for PF01066.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits