YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30254638, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	485 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30254638, gi|....

Description	E-value	Query Range	Subject Range
gi\|52144432, gi\|... - gi\|52144432\|ref\|YP_082397.1\| alginate O-acetyltransferase [Bacillus cereus E33L], gi\|51977901\|gb\|AAU...	1.0E-91	[1..485]	[1..485]
gi\|42780052, gi\|... - gi\|42780052\|ref\|NP_977299.1\| alginate O-acetyltransferase, putative [Bacillus cereus ATCC 10987], gi...	4.0E-90	[1..485]	[1..485]
gi\|213967108, gi... - gi\|213967108\|ref\|ZP_03395257.1\| alginate biosynthesis protein AlgI [Pseudomonas syringae pv. tomato ... ALGI_PSESM - Probable poly(beta-D-mannuronate) O-acetylase OS=Pseudomonas syringae pv. tomato GN=algI PE=3 SV=1 ALGI_PSESM - Probable alginate O-acetylase AlgI OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=algI PE=3 S...	8.0E-89	[1..485]	[1..518]
gi\|66044308, gi\|... - gi\|66044308\|ref\|YP_234149.1\| membrane bound O-acyl transferase, MBOAT [Pseudomonas syringae pv. syri...	1.0E-88	[1..485]	[1..518]
gi\|71558191, gi\|... - gi\|71737638\|ref\|YP_273378.1\| alginate biosynthesis protein AlgI [Pseudomonas syringae pv. phaseolico...	4.0E-88	[1..485]	[1..518]
gi\|89151494, gi\|... - gi\|89200423\|ref\|ZP_01179176.1\| Membrane bound O-acyl transferase, MBOAT [Bacillus cereus subsp. cyto...	6.0E-88	[1..485]	[1..485]
gi\|77457179, gi\|... - gi\|77457179\|ref\|YP_346684.1\| membrane bound O-acyl transferase, MBOAT [Pseudomonas fluorescens Pf0-1...	3.0E-86	[1..485]	[1..521]
gi\|70728398, gi\|... - gi\|70728398\|ref\|YP_258147.1\| alginate biosynthesis protein AlgI [Pseudomonas fluorescens Pf-5], gi\|6...	4.0E-86	[1..485]	[1..520]
gi\|83309254, gi\|... - gi\|83309254\|ref\|YP_419518.1\| hypothetical protein amb0155 [Magnetospirillum magneticum AMB-1], gi\|82...	4.0E-84	[1..485]	[1..483]
ALGI_PSEPK - Probable alginate O-acetylase AlgI OS=Pseudomonas putida (strain KT2440) GN=algI PE=3 SV=1	5.0E-84	[1..485]	[1..485]

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Predicted Domain #1

Region A:
Residues: [1-219]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFNSFEFIF LFLPIAFLLY FLLNKFGQTT LAKAWLVAAS LFFYSYWNIK YLPLMLVSLI  60
   61 VNYFIGMKLV KHKSKLLLTV GLIFNIGMLS YFKYYDFFLQ NVNSLFGTHF TLLSLTLPLA 120
  121 ISFYTFQKIA FLVDTYRGET EACHFLDYAL FVTFFPQLIA GPIVHHAQIM PQFADRSKKR 180
  181 WQSNYIVLGI FVFAIGIFKK VGIADVLSPV VREGFDVQQ

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [220-386]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLTFVEAWLS SLAFTFQLYF DFSGYSDMAI GIALMFNIKL PQNFNSPYKA VSIQDFWHRW  60
   61 HMTLSQFLTK YVYISLGGNR KGITRTYVNI MIVFLISGLW HGAGWTFIFW GFLHGLASVV 120
  121 HRLWNKAGGR MPDWAGWLVT FFFINITWVF FRATSMHDAV KVLKGMF

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [387-485]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFNGFELANS VFPVFIIEKL QFLKEYGVSF TEAYHVSLLN TEIVAYIFGA LCISFFLKNS  60
   61 IQLKDSFRPT VWTALFTAIL LVYSVLHLTS ISEFLYFNF

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits