YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260928, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	332 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260928, gi|....

Description	E-value	Query Range	Subject Range
gi\|2983768, gi\|1... - gi\|2983768\|gb\|AAC07327.1\| alcohol dehydrogenase [Aquifex aeolicus VF5], gi\|15606558\|ref\|NP_213938.1\|... gi\|7427649 - pir\|\|C70418 probable alcohol dehydrogenase (EC 1.1.1.-) - Aquifex aeolicus	7.0E-74	[6..332]	[1..343]
gi\|40795502 - gi\|40795502\|gb\|AAR91477.1\| thermostable alcohol dehydrogenase [Geobacillus sp. M10EXG]	6.0E-73	[6..332]	[1..337]
gi\|86134306, gi\|... - gi\|86134306\|ref\|ZP_01052888.1\| zinc-binding dehydrogenase [Polaribacter sp. MED152], gi\|85821169\|gb\|...	1.0E-72	[4..331]	[10..335]
gi\|75812768, gi\|... - gi\|75812768\|ref\|YP_320385.1\| zinc-containing alcohol dehydrogenase superfamily protein [Anabaena var...	1.0E-71	[4..330]	[319..635]
gi\|15234529, gi\|... - pir\|\|T05166 quinone reductase homolog F18E5.200 - Arabidopsis thaliana, gi\|7268955\|emb\|CAB81265.1\| p...	1.0E-71	[6..330]	[1..324]
ADH3_GEOSE - Alcohol dehydrogenase OS=Geobacillus stearothermophilus PE=1 SV=1	2.0E-71	[6..332]	[1..337]
gi\|222055606, gi... - gi\|222055606\|ref\|YP_002537968.1\| Alcohol dehydrogenase zinc-binding domain protein [Geobacter sp. FR...	3.0E-70	[1..331]	[1..341]
gi\|56419266, gi\|... - gi\|56419266\|ref\|YP_146584.1\| alcohol dehydrogenase [Geobacillus kaustophilus HTA426], gi\|56379108\|db...	1.0E-69	[6..331]	[1..336]

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Predicted Domain #1

Region A:
Residues: [1-332]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHTSFRAIV VNETESKQFV RNVVAREVSS LPEGDVFIQV HYSSLNYKDA LSATGNKGVT  60
   61 RIYPHTPGID AAGVVVSSKD ATIKAGDQVI VTGYDLGMNT SGGFGEYIRV PASWIVPLPE 120
  121 EMSLKESMMY GTAGFTAALS VYKLIGAGIT PSMGDVLVTG ATGGVGSVAV SILSKLGFNV 180
  181 VGATGKMEEE EMLLRLGAKK VIHRAELNDE SGRPMLQGIY AGVIDTVGGH MLETALKTVK 240
  241 YGGCVTTCGN VAGQELQTTV YPFILRGISL LGIDSVQCPV DVRRDVWTLL ANEWGNKELR 300
  301 SYTEECILEE LDEKFTLILQ GRLKGRTVIN MK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	55.39794
Match:	1xa0A
Description:	Crystal Structure of MCSG Target APC35536 from Bacillus stearothermophilus
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
oxidoreductase activity	3.00069798806876	bayes_pls_golite062009
catalytic activity	2.16785883389468	bayes_pls_golite062009
alcohol dehydrogenase (NAD) activity	1.88863369347022	bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors	1.3919444853018	bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	1.27605103494323	bayes_pls_golite062009
alcohol dehydrogenase activity, zinc-dependent	1.09344283680379	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: