YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260889, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	193 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260889, gi|....

Description	E-value	Query Range	Subject Range
KDPC_BACC1 - Potassium-transporting ATPase KdpC subunit OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=kdpC ...	4.0E-78	[1..193]	[1..193]
ATKC_BACHK - Potassium-transporting ATPase C chain OS=Bacillus thuringiensis subsp. konkukian GN=kdpC PE=3 SV=1 KDPC_BACHK - Potassium-transporting ATPase KdpC subunit OS=Bacillus thuringiensis subsp. konkukian (strain 97-27)...	3.0E-77	[1..193]	[1..193]
KDPC_BACCR - Potassium-transporting ATPase KdpC subunit OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152... gi\|229126168, gi... - gi\|229126168\|ref\|ZP_04255186.1\| Potassium-transporting ATPase C chain [Bacillus cereus BDRD-Cer4], g...	5.0E-77	[1..193]	[1..193]
KDPC_BACCZ - Potassium-transporting ATPase KdpC subunit OS=Bacillus cereus (strain ZK / E33L) GN=kdpC PE=3 SV=1	6.0E-77	[1..193]	[1..193]
gi\|75761131, gi\|... - gi\|75761131\|ref\|ZP_00741124.1\| Potassium-transporting ATPase C chain [Bacillus thuringiensis serovar...	1.0E-76	[1..193]	[13..205]
KDPC_BACWK - Potassium-transporting ATPase KdpC subunit OS=Bacillus weihenstephanensis (strain KBAB4) GN=kdpC PE=... gi\|229010169, gi... - gi\|229010169\|ref\|ZP_04167379.1\| Potassium-transporting ATPase C chain [Bacillus mycoides DSM 2048], ...	1.0E-76	[1..193]	[1..193]
gi\|47564674, gi\|... - gi\|47564674\|ref\|ZP_00235718.1\| potassium-transporting ATPase, C subunit [Bacillus cereus G9241], gi\|...	2.0E-76	[1..193]	[1..193]
KDPC_CALS4 - Potassium-transporting ATPase KdpC subunit OS=Caldanaerobacter subterraneus subsp. tengcongensis (st... gi\|223489007, gi... - gi\|254479185\|ref\|ZP_05092533.1\| K+-transporting ATPase, C subunit [Carboxydibrachium pacificum DSM 1... ATKC_THETN - Potassium-transporting ATPase C chain OS=Thermoanaerobacter tengcongensis GN=kdpC PE=3 SV=1	2.0E-76	[8..193]	[5..190]
ATKC_GEOSL - Potassium-transporting ATPase C chain OS=Geobacter sulfurreducens GN=kdpC PE=3 SV=1 KDPC_GEOSL - Potassium-transporting ATPase KdpC subunit OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 1212...	4.0E-73	[5..192]	[1..188]
KDPC_GEOMG - Potassium-transporting ATPase KdpC subunit OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 /...	6.0E-73	[5..191]	[1..187]

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Predicted Domain #1

Region A:
Residues: [1-193]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKQSILSP IIRITFTFLV LCGLVYPLIV TGIAQAVMKD NADGSLIYND KNEVIGSKLI  60
   61 GQNFTDPRYF HGRVSSIEYK AEASGSNNYA PSNPDLEKRV EKSIEEWKKQ NPSVPVTEVP 120
  121 IDLVTNSGSG LDPDISPKAA SVQVERISKL TNIPKETLDQ LIKDQTEGAA LGLFGETRVN 180
  181 VLKLNLGLQK IMK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	62.69897
Match:	PF02669.6
Description:	No description for PF02669.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits