YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30254201, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	487 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30254201, gi|....

Description	E-value	Query Range	Subject Range
gi\|25330910 - pir\|\|D86762 conserved hypothetical protein ylaF [imported] - Lactococcus lactis subsp. lactis (strai... gi\|15673082, gi\|... - gi\|15673082\|ref\|NP_267256.1\| nicotinate phosphoribosyltransferase [Lactococcus lactis subsp. lactis ...	0.0	[2..481]	[8..487]
gi\|29344577, gi\|... - gi\|29377111\|ref\|NP_816265.1\| nicotinate phosphoribosyltransferase [Enterococcus faecalis V583], gi\|2... gi\|227176746, gi... - gi\|227554120\|ref\|ZP_03984167.1\| nicotinate phosphoribosyltransferase [Enterococcus faecalis HH22], g... gi\|229309899, gi... - gi\|229545007\|ref\|ZP_04433732.1\| nicotinate phosphoribosyltransferase [Enterococcus faecalis TX1332],... gi\|227519690, gi... - gi\|227519690\|ref\|ZP_03949739.1\| nicotinate phosphoribosyltransferase [Enterococcus faecalis TX0104],... gi\|229305488, gi... - gi\|229549251\|ref\|ZP_04437976.1\| nicotinate phosphoribosyltransferase [Enterococcus faecalis ATCC 292... gi\|238830142, gi... - gi\|238857214\|ref\|ZP_04647464.1\| putative nicotinate phosphoribosyltransferase [Enterococcus faecalis...	0.0	[2..483]	[3..485]
gi\|28270279, gi\|... - gi\|28377447\|ref\|NP_784339.1\| nicotinate phosphoribosyltransferase [Lactobacillus plantarum WCFS1], g...	0.0	[4..484]	[5..486]
gi\|49331745, gi\|... - gi\|49480189\|ref\|YP_034854.1\| nicotinate phosphoribosyltransferase [Bacillus thuringiensis serovar ko... gi\|228932025, gi... - gi\|228932025\|ref\|ZP_04094917.1\| Nicotinate phosphoribosyltransferase [Bacillus thuringiensis serovar... gi\|51978182, gi\|... - gi\|52144713\|ref\|YP_082115.1\| nicotinate phosphoribosyltransferase [Bacillus cereus E33L], gi\|5197818... gi\|228925785, gi... - gi\|228925785\|ref\|ZP_04088869.1\| Nicotinate phosphoribosyltransferase [Bacillus thuringiensis serovar... gi\|196027802, gi... - gi\|196041317\|ref\|ZP_03108611.1\| putative nicotinate phosphoribosyltransferase [Bacillus cereus NVH05...	0.0	[1..487]	[1..487]
gi\|229177126, gi... - gi\|229177126\|ref\|ZP_04304515.1\| Nicotinate phosphoribosyltransferase [Bacillus cereus 172560W], gi\|2... gi\|29894324, gi\|... - gi\|30018783\|ref\|NP_830414.1\| nicotinate phosphoribosyltransferase [Bacillus cereus ATCC 14579], gi\|2... gi\|206968587, gi... - gi\|206968587\|ref\|ZP_03229543.1\| putative nicotinate phosphoribosyltransferase [Bacillus cereus AH113... gi\|218232668, gi... - gi\|218232668\|ref\|YP_002365395.1\| putative nicotinate phosphoribosyltransferase [Bacillus cereus B426...	0.0	[1..487]	[1..487]
gi\|228899284, gi... - gi\|228899284\|ref\|ZP_04063547.1\| Nicotinate phosphoribosyltransferase [Bacillus thuringiensis IBL 422... gi\|75761179, gi\|... - gi\|75761179\|ref\|ZP_00741168.1\| Nicotinate phosphoribosyltransferase [Bacillus thuringiensis serovar ... gi\|218541813, gi... - gi\|218895653\|ref\|YP_002444064.1\| putative nicotinate phosphoribosyltransferase [Bacillus cereus G984...	0.0	[1..487]	[1..487]
gi\|89201528, gi\|... - gi\|89201528\|ref\|ZP_01180267.1\| Nicotinate phosphoribosyltransferase related [Bacillus cereus subsp. ...	0.0	[1..487]	[1..487]
gi\|42735659, gi\|... - gi\|42779742\|ref\|NP_976989.1\| nicotinate phosphoribosyltransferase [Bacillus cereus ATCC 10987], gi\|4...	0.0	[1..487]	[1..487]
gi\|47567176, gi\|... - gi\|47567176\|ref\|ZP_00237892.1\| nicotinate phosphoribosyltransferase, putative [Bacillus cereus G9241...	0.0	[1..487]	[1..487]

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Predicted Domain #1

Region A:
Residues: [1-487]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYYKDDSYA LHTDLYQINM AYTYWKDGIH NRRSVFDLYF RKLPFENGYA VFAGLEKIVE  60
   61 YIENFSFTES DIAYLAELQF EEEFLHYLQN MKFTGTVRSM QEGEVVFNNE PLLRVDAPLG 120
  121 EAQIIETALL NIVNYQTLIA TKAARMKHAA NNDELLEFGT RRAHEFDAAL WGTRAAFIGG 180
  181 FSSTSNVRAG KRFGIPVAGT HAHSFVQAYR DEYVAFKKYA ETHKKCVFLV DTYDTLKSGV 240
  241 PNAIRVAKEF GDRIDFYGIR LDSGDMAYLS KKARKLLDEA GFTNTKIIAS SDLDEYTIMH 300
  301 LKSQGAKINV WGVGTKLITS FEQPALGAVY KLVAIEDTDG KLNDTIKISS NPEKITTPGL 360
  361 KRIYRIINRV NDHAEGDYIA LDYEEPGKEE RLKMFHPVHT YISKFVTNFE ARELHKDIFV 420
  421 NGERTYELPS ILDIQKYNEQ SLSLFWEEYM RTLNPEEYPV DLSQECWDHK MNYIQTVREQ 480
  481 VEKNIQK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	164.0
Match:	2f7fA
Description:	Crystal structure of Enterococcus faecalis putative nicotinate phosphoribosyltransferase, NEW YORK STRUCTURAL GENOMICS CONSORTIUM
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
nicotinate phosphoribosyltransferase activity	6.27751846600304	bayes_pls_golite062009
nicotinate-nucleotide diphosphorylase (carboxylating) activity	3.12788282156037	bayes_pls_golite062009
transferase activity, transferring glycosyl groups	1.28938930256604	bayes_pls_golite062009
binding	0.653855264785782	bayes_pls_golite062009
catalytic activity	0.60409960326459	bayes_pls_golite062009
protein binding	0.317577842532028	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: