YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|49183508, gi\|...
Organism:	Bacillus anthracis str. Sterne
Length:	518 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49183508, gi|....

Description	E-value	Query Range	Subject Range
gi\|49480124, gi\|... - gi\|49480124\|ref\|YP_034773.1\| glycosyltransferase, involved in cell wall biogenesis [Bacillus thuring...	6.0E-63	[1..518]	[1..518]
gi\|42735558, gi\|... - gi\|42779642\|ref\|NP_976889.1\| glycosyl transferase, group 2 family protein [Bacillus cereus ATCC 1098...	2.0E-62	[1..518]	[1..518]
gi\|51978270, gi\|... - gi\|52144801\|ref\|YP_082028.1\| glycosyltransferase, involved in cell wall biogenesis [Bacillus cereus ...	6.0E-62	[1..518]	[1..518]
gi\|29894236, gi\|... - gi\|30018695\|ref\|NP_830326.1\| cell wall biosynthesis glycosyltransferase [Bacillus cereus ATCC 14579]...	4.0E-61	[1..518]	[1..518]
gi\|165870712, gi... - gi\|165870712\|ref\|ZP_02215365.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|167634820, gi... - gi\|167634820\|ref\|ZP_02393139.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|167511188, gi... - gi\|167640794\|ref\|ZP_02399053.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|47525778, gi\|... - gi\|47525778\|ref\|YP_017127.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str. '... gi\|170688623, gi... - gi\|170688623\|ref\|ZP_02879829.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|30260667, gi\|... - gi\|30260667\|ref\|NP_843044.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str. A... gi\|170707155, gi... - gi\|170707155\|ref\|ZP_02897611.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|21398454, gi\|... - gi\|65317926\|ref\|ZP_00390885.1\| COG0463: Glycosyltransferases involved in cell wall biogenesis [Bacil... gi\|177655147, gi... - gi\|177655147\|ref\|ZP_02936777.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|254762097 - gi\|254762097\|ref\|ZP_05213946.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|254756278 - gi\|254756278\|ref\|ZP_05208307.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|254743739 - gi\|254743739\|ref\|ZP_05201424.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|254738877 - gi\|254738877\|ref\|ZP_05196579.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|254686896 - gi\|254686896\|ref\|ZP_05150754.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|229266564, gi... - gi\|229602156\|ref\|YP_002865111.1\| glycosyl transferase, group 2 family [Bacillus anthracis str. A0248... gi\|227816620, gi... - gi\|227816620\|ref\|YP_002816629.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis st... gi\|190568187, gi... - gi\|190568187\|ref\|ZP_03021096.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis Tsi...	9.0E-61	[5..518]	[1..514]
gi\|47567275, gi\|... - gi\|47567275\|ref\|ZP_00237989.1\| glycosyltransferase involved in cell wall biogenesis [Bacillus cereus...	5.0E-60	[5..518]	[1..514]
gi\|74492270, gi\|... - gi\|75760244\|ref\|ZP_00740298.1\| Glycosyltransferase / Glycosyltransferase [Bacillus thuringiensis se...	3.0E-59	[1..518]	[1..518]
gi\|163938435, gi... - gi\|89204659\|ref\|ZP_01183235.1\| Glycosyl transferase, family 2 [Bacillus weihenstephanensis KBAB4], g...	2.0E-58	[5..518]	[1..514]
gi\|227007676, gi... - gi\|227816624\|ref\|YP_002816633.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis st... gi\|229267861, gi... - gi\|229603453\|ref\|YP_002865108.1\| glycosyl transferase, group 2 family [Bacillus anthracis str. A0248... gi\|65317922 - gi\|65317922\|ref\|ZP_00390881.1\| COG0463: Glycosyltransferases involved in cell wall biogenesis [Bacil... gi\|167529909, gi... - gi\|167634835\|ref\|ZP_02393154.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|167511184, gi... - gi\|167640790\|ref\|ZP_02399049.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|165870642, gi... - gi\|165870642\|ref\|ZP_02215295.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|177655145, gi... - gi\|177655145\|ref\|ZP_02936775.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|190559523, gi... - gi\|190569367\|ref\|ZP_03022257.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis Tsi... gi\|170667482, gi... - gi\|170688622\|ref\|ZP_02879828.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|170707225, gi... - gi\|170707225\|ref\|ZP_02897681.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str...	1.0E-55	[2..518]	[7..513]

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Predicted Domain #1

Region A:
Residues: [1-314]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTMAKSLS VIIPAWNEID TISDVIQSVK GLNPLEIIVV ANGCTDGTET VAEHLGCKVL  60
   61 RYTEKLGNDV GRAAGAKESI GDVLLFIDGD FAIQTSKLQL FLNPILYNQA DVVLNNLDAL 120
  121 FLKRQKPNSI TVWRQILNSI LEREELKIDS LLAVPHALTK EVVQSIGYEC FVNPILAHLR 180
  181 LVQGKWRISR HCAIDVITPN KFRPTEHAAY GTDLSPSEKR MIGDHIEAVA ERIVGSDERG 240
  241 GYCDGNRKRD SVYHTLDFED FYQGWGVTSN LYKGKQLSVI IPVQDEEKTI GNVIEELRKI 300
  301 EPFEIIVVVN GSSD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.045757
Match:	2ffuA
Description:	Crystal Structure of Human ppGalNAcT-2 complexed with UDP and EA2
Matching Structure (courtesy of the PDB):

Predicted Domain #2

Region A:
Residues: [315-518]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QTATIAKDKG ATTIVYKEAL GNDVGRSLGT YFAKGEIVLF IDGDFVIPAS ELYPFAKAIA  60
   61 DGTDVALNDL NHYLDLRVPL HLVTAFKYAL NLACDRKDLG VGSLIAVPNA FSRKCLKQIG 120
  121 YRSLLAPCVA QVKAILSGFE VACVSRVEVD KMNRIRPSEH FAKIGHPPAV LRIIGDHIEG 180
  181 LEQLIGLTGS RGGFHDGNRK RDIL

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	2.8
Match:	2bo4A
Description:	Dissection of mannosylglycerate synthase: an archetypal mannosyltransferase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits