YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260636, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	189 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260636, gi|....

Description	E-value	Query Range	Subject Range
gi\|16801633 - gi\|16801633\|ref\|NP_471901.1\| hypothetical protein lin2571 [Listeria innocua Clip11262] gi\|25516491, gi\|... - pir\|\|AF1753 Orf50 [bacteriophage bIL285] homolog lin2571 [imported] - Listeria innocua (strain Clip1...	5.0E-53	[2..188]	[5..190]
gi\|30263657, gi\|... - gi\|30263657\|ref\|NP_846034.1\| prophage LambdaBa01, major tail protein, putative [Bacillus anthracis s... gi\|21401627, gi\|... - gi\|65320980\|ref\|ZP_00393939.1\| hypothetical protein Bant_01004428 [Bacillus anthracis str. A2012], r... gi\|49180430, gi\|... - gi\|49186503\|ref\|YP_029755.1\| prophage LambdaBa01, major tail protein, putative [Bacillus anthracis s... gi\|47504214, gi\|... - gi\|47529066\|ref\|YP_020414.1\| prophage lambdaba01, major tail protein, putative [Bacillus anthracis s... gi\|227813453, gi... - gi\|227813453\|ref\|YP_002813462.1\| putative prophage LambdaBa01, major tail protein [Bacillus anthraci... gi\|229111129, gi... - gi\|229111129\|ref\|ZP_04240686.1\| Prophage LambdaBa01, major tail protein [Bacillus cereus Rock1-15], ... gi\|165873070, gi... - gi\|165873070\|ref\|ZP_02217689.1\| putative prophage LambdaBa01, major tail protein [Bacillus anthracis... gi\|229269098, gi... - gi\|229604690\|ref\|YP_002867895.1\| putative prophage LambdaBa01, major tail protein [Bacillus anthraci... gi\|167527987, gi... - gi\|167636611\|ref\|ZP_02394904.1\| putative prophage LambdaBa01, major tail protein [Bacillus anthracis... gi\|254682274 - gi\|254682274\|ref\|ZP_05146135.1\| putative prophage LambdaBa01, major tail protein [Bacillus anthracis... gi\|167510164, gi... - gi\|167641875\|ref\|ZP_02400114.1\| putative prophage LambdaBa01, major tail protein [Bacillus anthracis... gi\|254721074 - gi\|254721074\|ref\|ZP_05182865.1\| putative prophage LambdaBa01, major tail protein [Bacillus anthracis... gi\|170666528, gi... - gi\|170689525\|ref\|ZP_02880713.1\| putative prophage LambdaBa01, major tail protein [Bacillus anthracis... gi\|254733679 - gi\|254733679\|ref\|ZP_05191395.1\| putative prophage LambdaBa01, major tail protein [Bacillus anthracis... gi\|170709190, gi... - gi\|170709190\|ref\|ZP_02899614.1\| putative prophage LambdaBa01, major tail protein [Bacillus anthracis... gi\|254744690 - gi\|254744690\|ref\|ZP_05202368.1\| putative prophage LambdaBa01, major tail protein [Bacillus anthracis... gi\|172080113, gi... - gi\|177655436\|ref\|ZP_02936911.1\| putative prophage LambdaBa01, major tail protein [Bacillus anthracis... gi\|254751288 - gi\|254751288\|ref\|ZP_05203325.1\| putative prophage LambdaBa01, major tail protein [Bacillus anthracis... gi\|190559583, gi... - gi\|190569324\|ref\|ZP_03022217.1\| putative prophage LambdaBa01, major tail protein [Bacillus anthracis... gi\|254759504 - gi\|254759504\|ref\|ZP_05211529.1\| putative prophage LambdaBa01, major tail protein [Bacillus anthracis...	3.0E-49	[2..189]	[3..193]
gi\|51975297, gi\|... - gi\|52141828\|ref\|YP_085001.1\| prophage pi2 protein 39 [Bacillus cereus E33L], gi\|51975297\|gb\|AAU16847...	3.0E-49	[2..189]	[3..193]
gi\|50914479, gi\|... - gi\|50914479\|ref\|YP_060451.1\| prophage pi2 protein 39 [Streptococcus pyogenes MGAS10394], gi\|50903553... gi\|40218577, gi\|... - gi\|50261622\|gb\|AAT72390.1\| unknown [Streptococcus pyogenes], gi\|40218577\|gb\|AAR83231.1\| hypothetical...	7.0E-49	[2..189]	[4..191]
gi\|89153388, gi\|... - gi\|89208688\|ref\|ZP_01187181.1\| Phage major tail protein phi13 [Bacillus weihenstephanensis KBAB4], g...	3.0E-48	[2..189]	[3..193]
gi\|25401419 - pir\|\|F86755 prophage pi2 protein 39 [imported] - Lactococcus lactis subsp. lactis (strain IL1403) gi\|13095730, gi\|... - gi\|13095730\|ref\|NP_076622.1\| Orf50 [Lactococcus phage bIL285], gi\|12830919\|gb\|AAK08275.1\|AF323668_50... gi\|12723999, gi\|... - gi\|15673028\|ref\|NP_267202.1\| prophage pi2 protein 39 [Lactococcus lactis subsp. lactis Il1403], gi\|1...	7.0E-48	[2..185]	[6..187]
gi\|109647289, gi... - gi\|68207374\|ref\|ZP_00559538.1\| Phage major tail protein phi13 [Desulfitobacterium hafniense DCB-2], ...	3.0E-46	[4..186]	[1..186]
gi\|67849977, gi\|... - gi\|67916093\|ref\|ZP_00509815.1\| Phage major tail protein phi13 [Clostridium thermocellum ATCC 27405],...	2.0E-45	[4..188]	[1..193]
gi\|74489842, gi\|... - gi\|75762662\|ref\|ZP_00742503.1\| prophage pi2 protein 39 [Bacillus thuringiensis serovar israelensis A...	3.0E-45	[2..188]	[3..190]

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Predicted Domain #1

Region A:
Residues: [1-189]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENKVVFGLK KVHYSVITED SSGKITYGTP AKLPGAVKMK LDPKGEQSDF WADDSNYYTD  60
   61 SSNQGYEGTL NIANITEAFR TDVLGEILDE DDQVLTEVSN AKIKRIALMF EFDGDVKATR 120
  121 HLLYNVSVSR PGFGSSTKSD KTEPNTTELK FVASQHPETL NVKTSTKVTT PAGIYDAWYT 180
  181 KVYEKVVGA

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits