YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260632, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	90 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260632, gi|....

Description	E-value	Query Range	Subject Range
gi\|47778212, gi\|... - gi\|47778212\|ref\|YP_020419.2\| hypothetical protein GBAA3782 [Bacillus anthracis str. 'Ames Ancestor']... gi\|30258296, gi\|... - gi\|30263661\|ref\|NP_846038.1\| hypothetical protein BA3782 [Bacillus anthracis str. Ames], gi\|30258296... gi\|65320984 - gi\|65320984\|ref\|ZP_00393943.1\| hypothetical protein Bant_01004432 [Bacillus anthracis str. A2012]	138.0	[0..1]	[90..3]
gi\|49186507, gi\|... - gi\|49186507\|ref\|YP_029759.1\| hypothetical protein BAS3505 [Bacillus anthracis str. Sterne], gi\|49180... gi\|190559571, gi... - gi\|190569312\|ref\|ZP_03022205.1\| conserved domain protein [Bacillus anthracis Tsiankovskii-I], gi\|190... gi\|51975296, gi\|... - gi\|52141827\|ref\|YP_085005.1\| group-specific protein [Bacillus cereus E33L], gi\|51975296\|gb\|AAU16846.... gi\|177655432, gi... - gi\|177655432\|ref\|ZP_02936907.1\| conserved domain protein [Bacillus anthracis str. A0174], gi\|1720801... gi\|170709198, gi... - gi\|170709198\|ref\|ZP_02899622.1\| conserved domain protein [Bacillus anthracis str. A0389], gi\|1701259... gi\|170689509, gi... - gi\|170689509\|ref\|ZP_02880697.1\| conserved domain protein [Bacillus anthracis str. A0465], gi\|1706665... gi\|167510172, gi... - gi\|167641883\|ref\|ZP_02400122.1\| conserved domain protein [Bacillus anthracis str. A0193], gi\|1675101... gi\|167527975, gi... - gi\|167636599\|ref\|ZP_02394892.1\| conserved domain protein [Bacillus anthracis str. A0442], gi\|1675279... gi\|165873084, gi... - gi\|165873084\|ref\|ZP_02217703.1\| conserved domain protein [Bacillus anthracis str. A0488], gi\|1647111... gi\|254721078 - gi\|254721078\|ref\|ZP_05182869.1\| hypothetical protein BantA1_01315 [Bacillus anthracis str. A1055] gi\|254682278 - gi\|254682278\|ref\|ZP_05146139.1\| hypothetical protein BantC_00294 [Bacillus anthracis str. CNEVA-9066... gi\|229268281, gi... - gi\|229603873\|ref\|YP_002867899.1\| hypothetical protein BAA_3808 [Bacillus anthracis str. A0248], gi\|2... gi\|227006827, gi... - gi\|227813449\|ref\|YP_002813458.1\| hypothetical protein BAMEG_0852 [Bacillus anthracis str. CDC 684], ... gi\|254759500 - gi\|254759500\|ref\|ZP_05211525.1\| hypothetical protein BantA9_14416 [Bacillus anthracis str. Australia... gi\|254751292 - gi\|254751292\|ref\|ZP_05203329.1\| hypothetical protein BantV_02426 [Bacillus anthracis str. Vollum] gi\|254744686 - gi\|254744686\|ref\|ZP_05202364.1\| hypothetical protein BantKB_27425 [Bacillus anthracis str. Kruger B] gi\|254733683 - gi\|254733683\|ref\|ZP_05191399.1\| hypothetical protein BantWNA_00747 [Bacillus anthracis str. Western ...	138.0	[0..1]	[90..1]
gi\|163863540, gi... - gi\|89208684\|ref\|ZP_01187177.1\| Uncharacterized phage protein (possible DNA packaging) [Bacillus weih...	137.0	[0..1]	[90..1]
gi\|82745488, gi\|... - gi\|82745488\|ref\|ZP_00908000.1\| Uncharacterized phage protein (possible DNA packaging) [Clostridium b...	66.0	[0..1]	[89..1]

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Predicted Domain #1

Region A:
Residues: [1-90]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILKDVKKTL RISHDALDDE INDSIEAARH DLMLSGVSSV KANNDDDPLI KRAIKVYCKA  60
   61 EFVTEAKEAE RFQASYNMLK NHLTLAGDYK

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits