YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260572, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	888 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260572, gi|....

Description	E-value	Query Range	Subject Range
gi\|49329467, gi\|... - gi\|49477911\|ref\|YP_034732.1\| cation-transporting ATPase A, P type (ATPase, E1-E2 type) [Bacillus thu...	0.0	[1..888]	[1..888]
gi\|21398355, gi\|... - gi\|65317833\|ref\|ZP_00390792.1\| COG0474: Cation transport ATPase [Bacillus anthracis str. A2012], ref...	0.0	[1..888]	[1..888]
gi\|228860564, gi... - gi\|228899123\|ref\|ZP_04063395.1\| Cation-transporting ATPase, E1-E2 [Bacillus thuringiensis IBL 4222],... gi\|74490002, gi\|... - gi\|75762506\|ref\|ZP_00742366.1\| Calcium-transporting ATPase [Bacillus thuringiensis serovar israelens...	0.0	[1..888]	[1..888]
gi\|228657556, gi... - gi\|229125898\|ref\|ZP_04254923.1\| Cation-transporting ATPase, E1-E2 [Bacillus cereus BDRD-Cer4], gi\|22... gi\|30018656, gi\|... - gi\|30018656\|ref\|NP_830287.1\| calcium-transporting ATPase [Bacillus cereus ATCC 14579], gi\|29894197\|g...	0.0	[1..888]	[1..888]
gi\|51978310, gi\|... - gi\|52144841\|ref\|YP_081988.1\| cation-transporting ATPase A, P type (ATPase, E1-E2 type) [Bacillus cer...	0.0	[1..888]	[1..888]
gi\|47556073, gi\|... - gi\|47567230\|ref\|ZP_00237944.1\| cation-transporting ATPase, E1-E2 family [Bacillus cereus G9241], gi\|...	0.0	[1..888]	[1..888]
BACA1_BACC1 - Calcium-transporting ATPase 1 OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=BCE_0519 PE=1 SV=1	0.0	[1..888]	[1..888]
gi\|89204697, gi\|... - gi\|89204697\|ref\|ZP_01183273.1\| ATPase, E1-E2 type [Bacillus weihenstephanensis KBAB4], gi\|89157324\|g...	0.0	[1..887]	[1..887]
gi\|89209608, gi\|... - gi\|89209608\|ref\|ZP_01188003.1\| ATPase, E1-E2 type:Calcium-translocating P-type ATPase, PMCA-type [Ha...	0.0	[1..885]	[1..888]
gi\|114558784 - gi\|114558784\|ref\|XP_513679.2\| PREDICTED: hypothetical protein [Pan troglodytes]	0.0	[3..887]	[164..1132]

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Predicted Domain #1

Region A:
Residues: [1-888]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNWYSKTKD QTLIDLETNE QHGLTEEIVN ERLTQYGANE LATKQKRSLW QRIFAQINDV  60
   61 LVYVLIIAAL ISAFVGEWAD ASIIALVVVL NAVIGVVQES KAEQALEALK KMATPKAIVK 120
  121 RDGELKEIPS EHVVPGDIVM LDAGRYIPCD LRLIETANLK VEESALTGES VPVDKDAIYH 180
  181 PSMQSDEQVP LGDQKNMAFM STLVTYGRGV GVAVETGMNS QIGKIATLLH EADDDMTPLQ 240
  241 KSLAQVGKYL GFVAVAICIV MFLIGFLQGR DTLEMFMTAI SLAVAAIPEG LPAIVSIVLA 300
  301 IGVQRMIKQN VIIRKLPAVE ALGSVTIICS DKTGTLTQNK MTVTHFYSDN TYDQLERLNV 360
  361 NNDTQRLLLE NMVLCNDASY NNESQTGDPT EIALLVAGST FNMQKDHLEK IHERVNELPF 420
  421 DSDRKMMSTV HTYDESYYSM TKGAIDKLLP LCTHIFKNGK IEGLTEDDKN QILEAAEVMS 480
  481 QEALRVLSFA FKQYNSSDVD IDHLEENLIF IGLVGMIDPP RTEVKDSISE CKKAGIRTVM 540
  541 ITGDHKDTAF AIAKELGIAE EISEIMIGTE LDNISDTELA NKINHLHVFA RVSPEHKVKI 600
  601 VKALRAKGNI VSMTGDGVND APSLKQADVG VAMGITGTDV AKGAADVVLT DDNFSSIVKA 660
  661 VEEGRNIYRN IKKSILFLLS CNFGEIIALF LAILLGWATP LRPIHILWVN LITDTLPALS 720
  721 LGVDPEDPDV MKEKPRHAKE SLFSGSVPFL IFNGFVIGLL TLIAFIAGAK FYTGDTNLFP 780
  781 LFPERIDEDA LLHAQTMAFV VLSFSQLVHS FNLRSRTKSI FSIGIFTNKY LVFSLLIGVL 840
  841 MQVCIISIPP LANIFGVHAL TMRDWGFVLL LSIIPLVVNE FIKLVKRN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	1000.0
Match:	1iwoA
Description:	Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits