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View Structure Prediction Details

Protein: gi|49183392, gi|...
Organism: Bacillus anthracis str. Sterne
Length: 437 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49183392, gi|....

Description E-value Query
Range
Subject
Range
gi|91190532, gi|... - gi|91224644|ref|ZP_01259905.1| anaerobic C4-dicarboxylate transporter [Vibrio alginolyticus 12G01], ...
0.0 [1..436] [1..440]
gi|116186715, gi... - gi|75857528|ref|ZP_00765142.1| COG2704: Anaerobic C4-dicarboxylate transporter [Vibrio sp. Ex25], gi...
0.0 [1..436] [1..440]
gi|153836878, gi... - gi|153836878|ref|ZP_01989545.1| anaerobic C4-dicarboxylate membrane transporter [Vibrio parahaemolyt...
gi|28809282, gi|... - gi|28809282|dbj|BAC62324.1| anaerobic C4-dicarboxylate transporter [Vibrio parahaemolyticus RIMD 221...
gi|28900836, gi|... - gi|28900836|ref|NP_800491.1| anaerobic C4-dicarboxylate transporter [Vibrio parahaemolyticus RIMD 22...
0.0 [1..436] [1..440]
gi|254223211, gi... - gi|75823496|ref|ZP_00752993.1| COG2704: Anaerobic C4-dicarboxylate transporter [Vibrio cholerae RC38...
tr|D7HAL9|D7HAL9... - Anaerobic C4-dicarboxylate transporter OS=Vibrio cholerae RC385 GN=VCRC385_02388 PE=3 SV=1
0.0 [1..436] [1..440]
gi|153825023, gi... - gi|153825023|ref|ZP_01977690.1| anaerobic C4-dicarboxylate membrane transporter [Vibrio cholerae MZO...
gi|227811828, gi... - gi|227811828|ref|YP_002811838.1| C4-dicarboxylate transporter, anaerobic [Vibrio cholerae M66-2], gi...
gi|229506631, gi... - gi|229506631|ref|ZP_04396140.1| C4-dicarboxylate like transporter [Vibrio cholerae BX 330286], gi|22...
gi|11278444 - pir||F82488 C4-dicarboxylate transporter, anaerobic VCA0205 [imported] - Vibrio cholerae (strain N16...
gi|229348680, gi... - gi|229514700|ref|ZP_04404161.1| C4-dicarboxylate like transporter [Vibrio cholerae TMA 21], gi|22934...
gi|229517297, gi... - gi|229517297|ref|ZP_04406742.1| C4-dicarboxylate like transporter [Vibrio cholerae RC9], gi|22934533...
gi|121549060, gi... - gi|121586763|ref|ZP_01676546.1| C4-dicarboxylate transporter, anaerobic [Vibrio cholerae 2740-80], g...
gi|229526172, gi... - gi|229526172|ref|ZP_04415576.1| C4-dicarboxylate like transporter [Vibrio cholerae bv. albensis VL42...
gi|124118967, gi... - gi|153222330|ref|ZP_01953080.1| C4-dicarboxylate transporter, anaerobic [Vibrio cholerae MAK 757], g...
gi|229605108, gi... - gi|229605108|ref|YP_002875812.1| C4-dicarboxylate like transporter [Vibrio cholerae MJ-1236], gi|229...
gi|153816778, gi... - gi|153816778|ref|ZP_01969445.1| C4-dicarboxylate transporter, anaerobic [Vibrio cholerae NCTC 8457],...
gi|153822634, gi... - gi|229510571|ref|ZP_04400051.1| C4-dicarboxylate like transporter [Vibrio cholerae B33], gi|22935301...
gi|15600974, gi|... - gi|9657597|gb|AAF96117.1| C4-dicarboxylate transporter, anaerobic [Vibrio cholerae O1 biovar eltor s...
gi|125618520, gi... - gi|75830980|ref|ZP_00760249.1| COG2704: Anaerobic C4-dicarboxylate transporter [Vibrio cholerae MO10...
gi|75825755, gi|... - gi|75825755|ref|ZP_00755191.1| COG2704: Anaerobic C4-dicarboxylate transporter [Vibrio cholerae O395...
gi|121629966, gi... - gi|75816511|ref|ZP_00746979.1| COG2704: Anaerobic C4-dicarboxylate transporter [Vibrio cholerae V52]...
0.0 [1..436] [1..440]
gi|75820424, gi|... - gi|75820424|ref|ZP_00750472.1| COG2704: Anaerobic C4-dicarboxylate transporter [Vibrio cholerae V51]...
0.0 [1..436] [1..440]
gi|37676574, gi|... - gi|37676574|ref|NP_936970.1| anaerobic C4-dicarboxylate transporter [Vibrio vulnificus YJ016], gi|37...
0.0 [15..436] [40..465]
gi|84378385, gi|... - gi|84386857|ref|ZP_00989882.1| anaerobic C4-dicarboxylate transporter [Vibrio splendidus 12B01], gi|...
gi|85837857, gi|... - gi|86144958|ref|ZP_01063290.1| anaerobic C4-dicarboxylate transporter [Vibrio sp. MED222], gi|858378...
0.0 [1..435] [1..439]
gi|15603783, gi|... - gi|15603783|ref|NP_246857.1| anaerobic C4-dicarboxylate transporter [Pasteurella multocida subsp. mu...
0.0 [1..436] [1..442]
gi|27366799, gi|... - gi|27366799|ref|NP_762326.1| anaerobic C4-dicarboxylate transporter [Vibrio vulnificus CMCP6], gi|27...
0.0 [15..436] [15..440]

Back

Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFWLQFLTLL LCIFIGARLG GVGLGVMGGV GMAILVFVFH LQPTAPPIDV MLMILAVITA  60
   61 AGALQAAGGM DYLVHLAEKA LRKNPKRITF FAPIVTYLFT LCAGTGHVAY SVLPVIAEVS 120
  121 RESGIRPERP MSIAVIASQQ AI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.516 0.157 transport a.64.1 Saposin
View Download 0.388 0.104 integral to membrane d.122.1 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
View Download 0.497 0.000 transport a.74.1 Cyclin-like
View Download 0.514 0.000 transport a.2.3 Chaperone J-domain
View Download 0.478 N/A N/A a.74.1 Cyclin-like

Predicted Domain #2
Region A:
Residues: [143-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TASPISAATV ALLAMLADYK ITLLDILKVS IPSTFIACMI AAFVASKMGK ELNEDPEYLK  60
   61 RLKEGMIPKI EEKKEFVGVK GAKLSVILFL VGTFLVVLLG SFEALR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [249-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGWIVDGKLA RLSMPNTIEM VMLTIAALII IFCKPNVESI VSGNVFKAGA TAVVAIFGIA  60
   61 WMGDTFFNGN LNMIQGSIQH LVTSAPWLFA IALFILSILL YSQAATVRAL MPLGLSLGI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [368-437]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPALLIAMFP AVNGYFFIPN YGTIVAAINF DRTGTTGIGK YVLNHSFMIP GLIATFTSIG  60
   61 IGMLLISIMF 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle