YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260491, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	485 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260491, gi|....

Description	E-value	Query Range	Subject Range
GATA_GEOKA - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacillus kaustophilus (strain HTA426) GN=gatA PE... GATA_GEOKA - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacillus kaustophilus GN=gatA PE=3 SV=1	0.0	[1..485]	[1..485]
GATA_GEOSE - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacillus stearothermophilus GN=gatA PE=3 SV=1	0.0	[1..485]	[1..485]
gi\|95132536, gi\|... - gi\|95931418\|ref\|ZP_01314126.1\| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfuromonas acetox...	0.0	[1..485]	[1..485]
GATA_BACC7 - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus cereus (strain AH187) GN=gatA PE=3 SV=1 gi\|228588797, gi... - gi\|229194694\|ref\|ZP_04321487.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus m1293... GATA_BACC1 - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=ga... gi\|206747550, gi... - gi\|206974310\|ref\|ZP_03235227.1\| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus H308... gi\|229137146, gi... - gi\|229137146\|ref\|ZP_04265765.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus BDRD-...	0.0	[1..485]	[1..485]
GATA_PELCD - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1...	0.0	[1..485]	[1..485]
GATA_BACCZ - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus cereus (strain ZK / E33L) GN=gatA PE=3 SV=...	0.0	[1..485]	[1..485]
GATA_BACHK - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus thuringiensis subsp. konkukian (strain 97-... gi\|228629353, gi... - gi\|229154073\|ref\|ZP_04282198.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus ATCC ... gi\|228693912, gi... - gi\|229089435\|ref\|ZP_04220706.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus Rock3... gi\|228776157, gi... - gi\|228983561\|ref\|ZP_04143766.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensi... GATA_BACC3 - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus cereus (strain 03BB102) GN=gatA PE=3 SV=1 GATA_BACAH - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus thuringiensis (strain Al Hakam) GN=gatA PE... gi\|228600787, gi... - gi\|229182702\|ref\|ZP_04309943.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus BGSC ... GATA_BACHK - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus thuringiensis subsp. konkukian GN=gatA PE=... gi\|196045236, gi... - gi\|196045236\|ref\|ZP_03112468.1\| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus 03BB... gi\|196028956, gi... - gi\|196040101\|ref\|ZP_03107403.1\| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus NVH0...	0.0	[1..485]	[1..485]
GATA_BACCR - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2... gi\|229143103, gi... - gi\|229143103\|ref\|ZP_04271536.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus BDRD-... gi\|229148708, gi... - gi\|229148708\|ref\|ZP_04276958.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus m1550... gi\|229107977, gi... - gi\|229107977\|ref\|ZP_04237604.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus Rock1... gi\|229125802, gi... - gi\|229125802\|ref\|ZP_04254828.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus BDRD-... gi\|228956738, gi... - gi\|228956738\|ref\|ZP_04118524.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensi...	0.0	[1..485]	[1..485]
GATA_BACC2 - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus cereus (strain G9842) GN=gatA PE=3 SV=1 gi\|228840348, gi... - gi\|228919241\|ref\|ZP_04082611.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensi... gi\|228899036, gi... - gi\|228899036\|ref\|ZP_04063309.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensi... gi\|228715069, gi... - gi\|229068061\|ref\|ZP_04201369.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus F6518... GATA_BACC4 - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus cereus (strain B4264) GN=gatA PE=3 SV=1 gi\|228808791, gi... - gi\|228950862\|ref\|ZP_04112985.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensi... gi\|228624028, gi... - gi\|229159457\|ref\|ZP_04287475.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus R3098... gi\|228705606, gi... - gi\|229077665\|ref\|ZP_04210295.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus Rock4... gi\|229188576, gi... - gi\|229188576\|ref\|ZP_04315615.1\| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus ATCC ... gi\|75760018, gi\|... - gi\|75760018\|ref\|ZP_00740084.1\| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Bacillus ...	0.0	[1..485]	[1..485]
GATA_BACHD - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus halodurans GN=gatA PE=3 SV=1 GATA_BACHD - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 1819...	0.0	[1..485]	[1..485]

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Predicted Domain #1

Region A:
Residues: [1-485]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFDHSVSE LHKKLNNKEI SVTDLVEESY KRIADVEDNV KAFLTLDEEN ARAKAKELDA  60
   61 KIGAEDNGLL FGMPIGVKDN IVTNGLRTTC ASKILANFDP IYDATVVQKL KAADTITIGK 120
  121 LNMDEFAMGS SNENSGFYAT KNPWNLDYVP GGSSGGSAAA VAAGEVLFSL GSDTGGSIRQ 180
  181 PAAYCGVVGL KPTYGRVSRY GLVAFASSLD QIGPITRTVE DNAYLLQAIS GLDRMDATSA 240
  241 NVEVGNYLAG LTGDVKGLRI AVPKEYLGEG VGEEARESVL AALKVLEGMG ATWEEVSLPH 300
  301 SKYALATYYL LSSSEASANL SRFDGVRYGV RSDNVNNLMD LYKNTRSEGF GDEVKRRIML 360
  361 GTFALSSGYY DAYYKKAQQV RTLIKNDFEN VFANYDVIIG PTTPTPAFKV GEKVDDPMTM 420
  421 YANDILTIPV NLAGVPAISV PCGFGANNMP LGLQIIGKHF DEATIYRVAH AFEQATDHHT 480
  481 KKASL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	150.0
Match:	2df4A
Description:	No description for 2df4A was found.

Predicted functions:

Term	Confidence	Notes
glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	7.42914157198604	bayes_pls_golite062009
ligase activity	3.16753436373904	bayes_pls_golite062009
binding	1.24905380693412	bayes_pls_golite062009
catalytic activity	0.906509857495572	bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	0.301483171038292	bayes_pls_golite062009
protein binding	0.276132955069873	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: