YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260478, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	669 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260478, gi|....

Description	E-value	Query Range	Subject Range
gi\|228899023, gi... - gi\|228899023\|ref\|ZP_04063296.1\| DNA ligase [Bacillus thuringiensis IBL 4222], gi\|228860598\|gb\|EEN049... gi\|74492583, gi\|... - gi\|75759916\|ref\|ZP_00739987.1\| NAD-dependent DNA ligase [Bacillus thuringiensis serovar israelensis ...	0.0	[1..669]	[1..669]
DNLJ_BACHD - DNA ligase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) G... DNLJ_BACHD - DNA ligase OS=Bacillus halodurans GN=ligA PE=3 SV=1	0.0	[1..667]	[1..667]
DNLJ_BACHK - DNA ligase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=ligA PE=3 SV=1 DNLJ_BACHK - DNA ligase OS=Bacillus thuringiensis subsp. konkukian GN=ligA PE=3 SV=1 DNLJ_BACAH - DNA ligase OS=Bacillus thuringiensis (strain Al Hakam) GN=ligA PE=3 SV=1 gi\|228600773, gi... - gi\|229182688\|ref\|ZP_04309929.1\| DNA ligase [Bacillus cereus BGSC 6E1], gi\|228600773\|gb\|EEK58352.1\| D... DNLJ_BACC3 - DNA ligase OS=Bacillus cereus (strain 03BB102) GN=ligA PE=3 SV=1	0.0	[1..669]	[1..669]
DNLJ_BACCZ - DNA ligase OS=Bacillus cereus (strain ZK / E33L) GN=ligA PE=3 SV=1	0.0	[1..669]	[1..669]
DNLJ_GEOKA - DNA ligase OS=Geobacillus kaustophilus (strain HTA426) GN=ligA PE=3 SV=1 DNLJ_GEOKA - DNA ligase OS=Geobacillus kaustophilus GN=ligA PE=3 SV=1	0.0	[1..669]	[1..667]
gi\|229125792, gi... - gi\|229125792\|ref\|ZP_04254818.1\| DNA ligase [Bacillus cereus BDRD-Cer4], gi\|228657649\|gb\|EEL13461.1\| ... DNLJ_BACCR - DNA ligase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRR...	0.0	[1..669]	[1..669]
DNLJ_GEOSE - DNA ligase OS=Geobacillus stearothermophilus GN=ligA PE=1 SV=1	0.0	[1..669]	[1..667]
DNLJ_BACC1 - DNA ligase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=ligA PE=3 SV=1	0.0	[1..669]	[1..669]
DNLJ_BACCN - DNA ligase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98) GN=ligA PE=...	0.0	[1..669]	[1..669]
DNLJ_BACWK - DNA ligase OS=Bacillus weihenstephanensis (strain KBAB4) GN=ligA PE=3 SV=1 gi\|229165272, gi... - gi\|229165272\|ref\|ZP_04293059.1\| DNA ligase [Bacillus cereus AH621], gi\|228618097\|gb\|EEK75135.1\| DNA ...	0.0	[1..669]	[1..669]

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Predicted Domain #1

Region A:
Residues: [1-669]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKEIAKKRI EELRDLLNTF NYQYHVLDNP SVSDAEYDRN MQELIKLEAE NPEFMSEDSP  60
   61 SIRVGGTVLD IFEKVTHKSP MLSLGNAFNE GDLRDFDRRV RQGIDDANVR YICELKIDGL 120
  121 AVSLHYEKGR FIQGATRGDG VTGEDITQNL KTIKAIPLRL NEEVTLEARG EAYMPKRSFV 180
  181 KLNEEKEQNG EDVFANPRNA AAGSIRQLDP KIAAKRNLSM FVYGLANVEE KTIPSHSESL 240
  241 DYLGELGFKT NPNRRTCETI EEVIAYVEEW QEKRPHLDYE IDGIVIKVDD VALQESLGTT 300
  301 AKSPRWAIAY KFPAEEVVTR LTGIELSVGR TGVVTPTAEL EPVRVAGTIV RRASLHNEDL 360
  361 IREKDIRIGD YVVVKKAGDI IPEVVNVIFD KRTGGEEEYH MPTHCPACES ELVRLEEEVA 420
  421 LRCINPTCPA QIREGLIHFV SRNAMNIDGL GERVITQLFD ADYIRTFADL YSLTKEQLLQ 480
  481 LERFGEKSAT NLVQAIENSK ENSLERLLFG LGIRHVGAKA ARTFAEHFET MDALVKATEE 540
  541 ELKAINEIGE KMAQSVVAYF DNEDVLELLQ QFKEYGVNMT YKGIKIADLQ NVESYFAGKT 600
  601 VVLTGKLEVM GRSEAKKKIE ALGGKVTGSV SKSTDLVVAG EAAGSKLAQA EKHNVEVWNE 660
  661 ERFLQELNK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	1000.0
Match:	2owoA
Description:	No description for 2owoA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits