YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260469, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	346 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260469, gi|....

Description	E-value	Query Range	Subject Range
PUR5_HAES1 - Phosphoribosylformylglycinamidine cyclo-ligase OS=Haemophilus somnus (strain 129Pt) GN=purM PE=3 SV=...	4.0E-89	[2..340]	[5..344]
PUR5_HISS2 - Phosphoribosylformylglycinamidine cyclo-ligase OS=Histophilus somni (strain 2336) GN=purM PE=3 SV=1	6.0E-89	[2..340]	[5..344]
gi\|91223510, gi\|... - gi\|91223510\|ref\|ZP_01258775.1\| phosphoribosylaminoimidazole synthetase [Vibrio alginolyticus 12G01],...	8.0E-89	[2..341]	[7..346]
PUR5_CHRVO - Phosphoribosylformylglycinamidine cyclo-ligase OS=Chromobacterium violaceum GN=purM PE=3 SV=1 PUR5_CHRVO - Phosphoribosylformylglycinamidine cyclo-ligase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM...	2.0E-88	[2..337]	[5..337]
PUR5_PSEA6 - Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA...	2.0E-88	[2..336]	[7..337]
gi\|46133483 - gi\|46133483\|ref\|ZP_00157266.2\| COG0150: Phosphoribosylaminoimidazole (AIR) synthetase [Haemophilus i... gi\|145638957, gi... - gi\|145638957\|ref\|ZP_01794565.1\| aspartate-semialdehyde dehydrogenase [Haemophilus influenzae PittII]... gi\|145629463, gi... - gi\|145629463\|ref\|ZP_01785261.1\| aspartate-semialdehyde dehydrogenase [Haemophilus influenzae 22.1-21...	3.0E-88	[3..333]	[6..332]
gi\|75856788, gi\|... - gi\|75856788\|ref\|ZP_00764411.1\| COG0150: Phosphoribosylaminoimidazole (AIR) synthetase [Vibrio sp. Ex...	3.0E-88	[2..332]	[7..333]
PUR5_VIBPA - Phosphoribosylformylglycinamidine cyclo-ligase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIM... PUR5_VIBPA - Phosphoribosylformylglycinamidine cyclo-ligase OS=Vibrio parahaemolyticus GN=purM PE=3 SV=1 gi\|153836988, gi... - gi\|153836988\|ref\|ZP_01989655.1\| phosphoribosylformylglycinamidine cyclo-ligase [Vibrio parahaemolyti...	3.0E-88	[2..332]	[7..333]
gi\|16077718, gi\|... - gi\|2632964\|emb\|CAB12470.1\| phosphoribosylaminoimidazole synthetase [Bacillus subtilis subsp. subtili... PUR5_BACSU - Phosphoribosylformylglycinamidine cyclo-ligase OS=Bacillus subtilis GN=purM PE=3 SV=1	4.0E-88	[1..342]	[1..342]
PUR5_HAEIN - Phosphoribosylformylglycinamidine cyclo-ligase OS=Haemophilus influenzae GN=purM PE=3 SV=1 PUR5_HAEIN - Phosphoribosylformylglycinamidine cyclo-ligase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11...	5.0E-88	[3..333]	[6..332]

Back

Predicted Domain #1

Region A:
Residues: [1-346]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANAYKQAGV DIEAGYEAVS RMKKHVQTTM RKEVLGGLGG FGGMFDLSKF ALEEPVLVSG  60
   61 TDGVGTKLML AFMADKHDTI GIDAVAMCVN DIVVQGAEPL FFLDYIACGK AEPSKIENIV 120
  121 KGISEGCRQA GCALIGGETA EMPGMYSTEE YDLAGFTVGI VDKKKIVTGE KIEAGHVLIG 180
  181 LASSGIHSNG YSLVRKVLLE DGELSLDRIY GRLELPLGEE LLKPTKIYVK PILELLKNHE 240
  241 VYGMAHITGG GFIENIPRML PEGIGAEIEL GSWKIQPIFS LLQEVGKLEE KEMFNIFNMG 300
  301 IGMVVAVKEE DAKDIVRLLE EQGETARIIG RTVQGAGVTF NGGKAL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	85.221849
Match:	2btuA
Description:	No description for 2btuA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits