YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260424, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	320 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260424, gi|....

Description	E-value	Query Range	Subject Range
gi\|228634894, gi... - gi\|229148636\|ref\|ZP_04276890.1\| UV DNA damage endonuclease [Bacillus cereus m1550], gi\|228634894\|gb\|... gi\|228657716, gi... - gi\|229125743\|ref\|ZP_04254772.1\| UV DNA damage endonuclease [Bacillus cereus BDRD-Cer4], gi\|228657716... gi\|228956671, gi... - gi\|228956671\|ref\|ZP_04118462.1\| UV DNA damage endonuclease [Bacillus thuringiensis serovar pakistani... gi\|29894037, gi\|... - gi\|30018497\|ref\|NP_830128.1\| putative UV damage endonuclease [Bacillus cereus ATCC 14579], gi\|298940... gi\|218231092, gi... - gi\|218231092\|ref\|YP_002365075.1\| putative UV-endonuclease [Bacillus cereus B4264], gi\|218159049\|gb\|A...	0.0	[1..320]	[1..320]
gi\|42735264, gi\|... - gi\|42779349\|ref\|NP_976596.1\| putative UV damage endonuclease [Bacillus cereus ATCC 10987], gi\|427352...	0.0	[1..320]	[1..320]
gi\|49481707, gi\|... - gi\|49481707\|ref\|YP_034575.1\| putative UV damage endonuclease [Bacillus thuringiensis serovar konkuki... gi\|228827921, gi... - gi\|228931741\|ref\|ZP_04094642.1\| UV DNA damage endonuclease [Bacillus thuringiensis serovar andalousi... gi\|228834157, gi... - gi\|228925495\|ref\|ZP_04088588.1\| UV DNA damage endonuclease [Bacillus thuringiensis serovar pondicher... gi\|218537804, gi... - gi\|218901441\|ref\|YP_002449275.1\| putative UV-endonuclease [Bacillus cereus AH820], gi\|218537804\|gb\|A... gi\|196041114, gi... - gi\|196041114\|ref\|ZP_03108410.1\| putative UV-endonuclease [Bacillus cereus NVH0597-99], gi\|196028049\|... gi\|254723570 - gi\|254723570\|ref\|ZP_05185357.1\| putative UV damage endonuclease [Bacillus anthracis str. A1055] gi\|196036014, gi... - gi\|196036014\|ref\|ZP_03103415.1\| putative UV-endonuclease [Bacillus cereus W], gi\|195991383\|gb\|EDX553... gi\|229119905, gi... - gi\|229119905\|ref\|ZP_04249163.1\| UV DNA damage endonuclease [Bacillus cereus 95/8201], gi\|228663543\|g... gi\|229089372, gi... - gi\|229089372\|ref\|ZP_04220647.1\| UV DNA damage endonuclease [Bacillus cereus Rock3-42], gi\|228693953\|... gi\|228944047, gi... - gi\|228944047\|ref\|ZP_04106430.1\| UV DNA damage endonuclease [Bacillus thuringiensis serovar monterrey...	0.0	[1..320]	[1..320]
gi\|163938238, gi... - gi\|89205764\|ref\|ZP_01184331.1\| UV-endonuclease UvdE [Bacillus weihenstephanensis KBAB4], gi\|89156354...	0.0	[1..320]	[1..320]
gi\|228860652, gi... - gi\|228898978\|ref\|ZP_04063255.1\| UV DNA damage endonuclease [Bacillus thuringiensis IBL 4222], gi\|228... gi\|75760679, gi\|... - gi\|75760679\|ref\|ZP_00740705.1\| UV-ENDONUCLEASE (UvsE/Uve1/UvdE Family) [Bacillus thuringiensis serov... gi\|228796360, gi... - gi\|228963332\|ref\|ZP_04124497.1\| UV DNA damage endonuclease [Bacillus thuringiensis serovar sotto str... gi\|218895360, gi... - gi\|218895360\|ref\|YP_002443771.1\| putative UV-endonuclease [Bacillus cereus G9842], gi\|218543444\|gb\|A...	0.0	[1..320]	[1..320]
gi\|229154008, gi... - gi\|229154008\|ref\|ZP_04282137.1\| UV DNA damage endonuclease [Bacillus cereus ATCC 4342], gi\|228629529... gi\|47567485, gi\|... - gi\|47567485\|ref\|ZP_00238197.1\| UV damage endonuclease, putative [Bacillus cereus G9241], gi\|47555887...	0.0	[1..320]	[1..320]
gi\|51978461, gi\|... - gi\|52144992\|ref\|YP_081837.1\| putative UV damage endonuclease [Bacillus cereus E33L], gi\|51978461\|gb\|...	0.0	[1..320]	[1..320]
gi\|196252698, gi... - gi\|196252698\|ref\|ZP_03151350.1\| UV-endonuclease UvdE [Clostridium thermocellum DSM 4150], gi\|1961978... gi\|67916298, gi\|... - gi\|67916298\|ref\|ZP_00510014.1\| UV-endonuclease UvdE [Clostridium thermocellum ATCC 27405], gi\|678497...	1.0E-92	[1..320]	[1..321]
gi\|221316009 - gi\|221316009\|ref\|ZP_03597814.1\| putative UV damage endonuclease [Bacillus subtilis subsp. subtilis s... gi\|221320920 - gi\|221320920\|ref\|ZP_03602214.1\| putative UV damage endonuclease [Bacillus subtilis subsp. subtilis s... gi\|221325204 - gi\|221325204\|ref\|ZP_03606498.1\| putative UV damage endonuclease [Bacillus subtilis subsp. subtilis s... UVSE_BACSU - UV DNA damage endonuclease OS=Bacillus subtilis GN=uvsE PE=3 SV=1 UVSE_BACSU - UV DNA damage endonuclease OS=Bacillus subtilis (strain 168) GN=uvsE PE=3 SV=1	8.0E-91	[1..320]	[1..319]

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Predicted Domain #1

Region A:
Residues: [1-320]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVRLGHVAM SVHLKNASPS QTMTYAQFQK IDDREAAIRK LERIANSNLE NCLRLLKHNK  60
   61 GHDISFFRLS SKLIPLANHE ELLEWNYIRP LKENLKVLGD YAIRMNMRID FHPDHFVVLN 120
  121 SPEENIFKQS VKTLQMHRKL LKGMGIEHKQ RCVMHVGGGY KDKELALERF IENWSNVPRG 180
  181 IQEMIMLEND DTTFTLEDTL YLGEKLDIPV VFDLHHHMMN HDREDWHEDW ARVVHTWESS 240
  241 LLPVKMHISS PREGKDPRAH ADFIDVDTFL SFLKKIKGSV PQIDCMIEAK MKDESLFQLM 300
  301 RDLSEQTDVE IIDGASFYIK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	71.221849
Match:	2j6vA
Description:	No description for 2j6vA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits