YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|65317637, gi\|...
Organism:	Bacillus anthracis str. A2012
Length:	277 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|65317637, gi|....

Description	E-value	Query Range	Subject Range
gi\|56378939, gi\|... - gi\|56419097\|ref\|YP_146415.1\| plant-metabolite dehydrogenase [Geobacillus kaustophilus HTA426], gi\|56...	4.0E-93	[3..277]	[1..275]
gi\|229009695, gi... - gi\|229009695\|ref\|ZP_04166919.1\| YtbE (Aldo/keto reductase YtbE) [Bacillus mycoides DSM 2048], gi\|228... gi\|228721306, gi... - gi\|229055034\|ref\|ZP_04195466.1\| YtbE (Aldo/keto reductase YtbE) [Bacillus cereus AH603], gi\|22872130... gi\|89205726, gi\|... - gi\|89205726\|ref\|ZP_01184293.1\| 2,5-didehydrogluconate reductase [Bacillus weihenstephanensis KBAB4],...	5.0E-90	[1..277]	[1..277]
gi\|74494062, gi\|... - gi\|75758435\|ref\|ZP_00738557.1\| Aldo/keto reductase family [Bacillus thuringiensis serovar israelensi... gi\|228860692, gi... - gi\|228898939\|ref\|ZP_04063218.1\| YtbE (Aldo/keto reductase YtbE) [Bacillus thuringiensis IBL 4222], g...	6.0E-90	[1..277]	[1..277]
gi\|49479174, gi\|... - gi\|49479174\|ref\|YP_034539.1\| aldo/keto reductase [Bacillus thuringiensis serovar konkukian str. 97-2...	7.0E-90	[1..277]	[1..277]
gi\|42779297, gi\|... - gi\|42779297\|ref\|NP_976544.1\| aldo/keto reductase family oxidoreductase [Bacillus cereus ATCC 10987],... gi\|217066335, gi... - gi\|217957765\|ref\|YP_002336309.1\| oxidoreductase, aldo/keto reductase family [Bacillus cereus AH187],... gi\|206977065, gi... - gi\|206977065\|ref\|ZP_03237965.1\| oxidoreductase, aldo/keto reductase family [Bacillus cereus H3081.97...	8.0E-90	[1..277]	[1..277]
gi\|51978495, gi\|... - gi\|52145026\|ref\|YP_081803.1\| aldo/keto reductase [Bacillus cereus E33L], gi\|51978495\|gb\|AAU20045.1\| ...	2.0E-89	[1..277]	[1..277]
gi\|89097650, gi\|... - gi\|89097650\|ref\|ZP_01170538.1\| YvgN [Bacillus sp. NRRL B-14911], gi\|89087509\|gb\|EAR66622.1\| YvgN [Ba...	2.0E-89	[5..277]	[4..276]
gi\|228983447, gi... - gi\|228983447\|ref\|ZP_04143659.1\| YtbE (Aldo/keto reductase YtbE) [Bacillus thuringiensis serovar toch... gi\|47567427, gi\|... - gi\|47567427\|ref\|ZP_00238139.1\| oxidoreductase, aldo/keto reductase family [Bacillus cereus G9241], g...	5.0E-89	[1..277]	[1..277]
gi\|228976948, gi... - gi\|228976948\|ref\|ZP_04137357.1\| YtbE (Aldo/keto reductase YtbE) [Bacillus thuringiensis Bt407], gi\|2... gi\|228606681, gi... - gi\|229176789\|ref\|ZP_04304191.1\| YtbE (Aldo/keto reductase YtbE) [Bacillus cereus 172560W], gi\|228606... gi\|116062045 - gi\|116062045\|dbj\|BAF34655.1\| benzil reductase [Bacillus cereus] gi\|228822152, gi... - gi\|228937489\|ref\|ZP_04100132.1\| YtbE (Aldo/keto reductase YtbE) [Bacillus thuringiensis serovar berl... gi\|228789314, gi... - gi\|228970377\|ref\|ZP_04131033.1\| YtbE (Aldo/keto reductase YtbE) [Bacillus thuringiensis serovar thur...	1.0E-88	[1..277]	[1..277]
gi\|89151284, gi\|... - gi\|89200682\|ref\|ZP_01179433.1\| 2,5-didehydrogluconate reductase [Bacillus cereus subsp. cytotoxis NV...	2.0E-88	[1..277]	[1..277]

Back

Predicted Domain #1

Region A:
Residues: [1-277]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTSLKDYT TLHNGVKMPW FGLGVFKVED GSQVIDSVKA AIKNGYRSID TAAIYQNEEG  60
   61 VGQAIRESGV SREELFITSK VWNSDQGYET TLQAFETTLE KLGLEYLDLY LVHWPVKGKY 120
  121 TESWKALEKL YKDGRVRAIG VSNFHIHHLQ DVFEIAEIKP MVNQVEYHPR LAQEELHAFC 180
  181 KEHNIQLEAW SPLMQGQLLD NPTLQDIAKK YNKSTAQIIL RWDLQNEVVT IPKSIKEHRI 240
  241 IENANIFDFE LSSDDMKAIQ ALNEDHRVGP DPDNFNF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	84.154902
Match:	1vbjA
Description:	The crystal structure of prostaglandin F synthase from Trypanosoma brucei
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits