YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260352, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	469 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260352, gi|....

Description	E-value	Query Range	Subject Range
gi\|52348807, gi\|... - gi\|52786305\|ref\|YP_092134.1\| 6-phosphogluconate dehydrogenase [Bacillus licheniformis ATCC 14580], g...	0.0	[1..469]	[1..468]
gi\|221323828 - gi\|221323828\|ref\|ZP_03605122.1\| 6-phosphogluconate dehydrogenase [Bacillus subtilis subsp. subtilis ... 6PGD_BACSU - 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating OS=Bacillus subtilis (strain 16... gi\|221319552 - gi\|221319552\|ref\|ZP_03600846.1\| 6-phosphogluconate dehydrogenase [Bacillus subtilis subsp. subtilis ... gi\|221314629 - gi\|221314629\|ref\|ZP_03596434.1\| 6-phosphogluconate dehydrogenase [Bacillus subtilis subsp. subtilis ... 6PGD2_BACSU - 6-phosphogluconate dehydrogenase, decarboxylating 2 OS=Bacillus subtilis GN=yqjI PE=1 SV=4	0.0	[1..469]	[1..468]
gi\|89099010, gi\|... - gi\|89099010\|ref\|ZP_01171889.1\| 6-phosphogluconate dehydrogenase [Bacillus sp. NRRL B-14911], gi\|8908...	0.0	[1..469]	[1..468]
gi\|56420879, gi\|... - gi\|56420879\|ref\|YP_148197.1\| 6-phosphogluconate dehydrogenase [Geobacillus kaustophilus HTA426], gi\|...	0.0	[1..469]	[1..468]
gi\|16803416 - gi\|16803416\|ref\|NP_464901.1\| 6-phosphogluconate dehydrogenase [Listeria monocytogenes EGD-e] gi\|254936378 - gi\|254936378\|ref\|ZP_05268075.1\| 6-phosphogluconate dehydrogenase [Listeria monocytogenes F6900] gi\|25283716, gi\|... - pir\|\|AH1246 6-phosphogluconate dehydrogenase homolog lmo1376 [imported] - Listeria monocytogenes (st... gi\|254898458, gi... - gi\|254898458\|ref\|ZP_05258382.1\| 6-phosphogluconate dehydrogenase [Listeria monocytogenes J0161], gi\|... gi\|47095960, gi\|... - gi\|47095960\|ref\|ZP_00233563.1\| 6-phosphogluconate dehydrogenase, decarboxylating [Listeria monocytog... gi\|153196155, gi... - gi\|254829866\|ref\|ZP_05234521.1\| 6-phosphogluconate dehydrogenase [Listeria monocytogenes 10403S], gi... gi\|153190773, gi... - gi\|254912051\|ref\|ZP_05262063.1\| 6-phosphogluconate dehydrogenase [Listeria monocytogenes J2818], gi\|... gi\|254827637, gi... - gi\|254827637\|ref\|ZP_05232324.1\| 6-phosphogluconate dehydrogenase [Listeria monocytogenes FSL N3-165]... gi\|224501680 - gi\|224501680\|ref\|ZP_03669987.1\| 6-phosphogluconate dehydrogenase [Listeria monocytogenes FSL R2-561] gi\|224499952 - gi\|224499952\|ref\|ZP_03668301.1\| 6-phosphogluconate dehydrogenase [Listeria monocytogenes Finland 198...	0.0	[1..468]	[1..467]
gi\|153202216, gi... - gi\|254932561\|ref\|ZP_05265920.1\| 6-phosphogluconate dehydrogenase [Listeria monocytogenes HPB2262], g... gi\|225876439, gi... - gi\|226223977\|ref\|YP_002758084.1\| 6-phosphogluconate dehydrogenase [Listeria monocytogenes Clip81459]... gi\|254852576 - gi\|254852576\|ref\|ZP_05241924.1\| 6-phosphogluconate dehydrogenase [Listeria monocytogenes FSL R2-503] gi\|254824564 - gi\|254824564\|ref\|ZP_05229565.1\| 6-phosphogluconate dehydrogenase [Listeria monocytogenes FSL J1-194] gi\|254880575 - gi\|254880575\|ref\|ZP_05253285.1\| 6-phosphogluconate dehydrogenase [Listeria monocytogenes FSL J2-071] gi\|254873031 - gi\|254873031\|ref\|ZP_05245741.1\| 6-phosphogluconate dehydrogenase [Listeria monocytogenes FSL N1-017] gi\|217333747, gi... - gi\|217964477\|ref\|YP_002350155.1\| 6-phosphogluconate dehydrogenase, decarboxylating [Listeria monocyt... gi\|46880872, gi\|... - gi\|46907604\|ref\|YP_013993.1\| 6-phosphogluconate dehydrogenase [Listeria monocytogenes str. 4b F2365]... gi\|16800481 - gi\|16800481\|ref\|NP_470749.1\| 6-phosphogluconate dehydrogenase [Listeria innocua Clip11262] gi\|25283715, gi\|... - pir\|\|AD1609 6-phosphogluconate dehydrogenase homolog lin1413 [imported] - Listeria innocua (strain C...	0.0	[1..468]	[1..467]
gi\|37525507, gi\|... - gi\|37525507\|ref\|NP_928851.1\| 6-phosphogluconate dehydrogenase [Photorhabdus luminescens subsp. laumo...	0.0	[1..469]	[1..467]
gi\|50120383, gi\|... - gi\|50120383\|ref\|YP_049550.1\| 6-phosphogluconate dehydrogenase [Pectobacterium atrosepticum SCRI1043]...	0.0	[1..469]	[1..467]
gi\|23097640, gi\|... - gi\|23097640\|ref\|NP_691106.1\| 6-phosphogluconate dehydrogenase [Oceanobacillus iheyensis HTE831], gi\|...	0.0	[3..468]	[2..467]
gi\|77975882, gi\|... - gi\|77975882\|ref\|ZP_00831416.1\| COG0362: 6-phosphogluconate dehydrogenase [Yersinia frederiksenii ATC...	0.0	[1..469]	[1..468]

Back

Predicted Domain #1

Region A:
Residues: [1-469]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENLQIGVVG VGVMGKSLAL NFESKGYSVA LYDISKEKVD ETIEENRGKN LVGTHIVEEF  60
   61 VNSLESPRKI LLMVNAGEIT DKAIDSLVPH LDKGDILIDG GNTYFVDTIR RNKRLAEEGI 120
  121 NFIGAGVSGG EEGALKGPSI MPGGQKDAYE KVKDMLENIS AKVNNEPCCS YIGPNGAGHY 180
  181 VKMVHNGIEY GDMQLICEAY FFLKQTLDLT AEEFHEIFAE WNKGELNSYL IEITADIFKK 240
  241 KDEETGKPLV DVILDTAGQK GTGKWTSQSA LDLGISLPII TESVFARCIS ALKEERVNAS 300
  301 KVLSGPKDKT AIGVEKAELI EAVRQALYMS KICSYAQGFT QLKAASEEYN WNLDFGSISM 360
  361 LWRGGCIIRA AFLQNIKEAY ETNTDLPNLL LDPYFKEIVE SYQGGLRQII SMAVQQGIPI 420
  421 PAFSAAISYY DSYRTAKLPA NLLQAQRDYF GAHTYKRVDK EGTFHTKWI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	128.0
Match:	2iyoA
Description:	No description for 2iyoA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits