YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|24195569, gi|...
Organism: Leptospira interrogans serovar Lai str. 56601
Length: 226 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24195569, gi|....

Description E-value Query
Range
Subject
Range
gi|116124805, gi... - gi|116331116|ref|YP_800834.1| hypothetical protein LBJ_1503 [Leptospira borgpetersenii serovar Hardj...
gi|116328390, gi... - gi|116328390|ref|YP_798110.1| hypothetical protein LBL_1727 [Leptospira borgpetersenii serovar Hardj...
194.0 [0..1] [226..1]

Back

Predicted Domain #1
Region A:
Residues: [1-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFKAGYLRS SIGRKTLVAA TGLVYFGFVV VHMLGNLQIF LGQEKINAYG QSLRDIAPLL  60
   61 WVARIILIVS FIIHVYYAIK LTIENRQARP VPYSKKNTVQ ATLASRTMAL TGLLIFSFIV 120
  121 YHLLHFTLGV TNPDHFAMTD AKGRHDIYTM VVLGFQNPIV ASSYIFAMLL LATHISHGVA 180
  181 SVFQTLGLNT PYFSGKIKAG AILFALLIFI GNTSIPLSIL LGYVHP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.69897
Match: 2bs2C
Description: No description for 2bs2C was found.

Predicted functions:

Term Confidence Notes
succinate dehydrogenase activity 10.6133558935785 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 8.00052083671124 bayes_pls_golite062009
oxidoreductase activity 5.99989196344185 bayes_pls_golite062009
electron carrier activity 4.50772505551128 bayes_pls_golite062009
catalytic activity 0.971825536251904 bayes_pls_golite062009
binding 0.105562378964133 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle