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View Structure Prediction Details

Protein: gi|45657404, gi|...
Organism: Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
Length: 282 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|45657404, gi|....

Description E-value Query
Range
Subject
Range
FLA2_TREPH - Flagellar filament 33 kDa core protein OS=Treponema phagedenis PE=1 SV=2
261.0 [0..1] [282..1]

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Predicted Domain #1
Region A:
Residues: [1-208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIINHNISAI FAHRTLKFNS ESMGKDIEKL SSGMRINRAG DDASGLAVSE KMRTQILGLR  60
   61 RAEMNTEDGM SLIQTTEGYL QETHEIVQRI RVLAVQAANG IYTEEDRQQI QVEVSQLVDE 120
  121 IDRIASQAEF NKMKLLTGAF ARLNPTASMW FHIGANMHQR ERVYIETMNT AALGLRNPTV 180
  181 LTFISLSTAG KANSVIGLAD DALRSISK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.045757
Match: 1ucuA
Description: R-type straight flagellar filament made of full-length flagellin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [209-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QRADLGAYYN RLEHAAKGLM NAYENIQAAE SRIRDTDMAE QMTSFTRYQI LTQAATAMLA  60
   61 QANMKPQTVL QLLK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.56
Match: 1ucuA
Description: R-type straight flagellar filament made of full-length flagellin
Matching Structure (courtesy of the PDB):

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