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View Structure Prediction Details

Protein: gi|45599755, gi|...
Organism: Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
Length: 260 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|45599755, gi|....

Description E-value Query
Range
Subject
Range
gi|116122039, gi... - gi|116329295|ref|YP_799015.1| endoflagellar motor protein [Leptospira borgpetersenii serovar Hardjo-...
gi|116330098, gi... - gi|116330098|ref|YP_799816.1| endoflagellar motor protein [Leptospira borgpetersenii serovar Hardjo-...
220.0 [0..1] [260..1]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFGTVVGFG GACVLMIFGI ISAGLSPLDI FDIPSVIITF GGATAGTIMA VPWESTLAVG  60
   61 KITQKVFKTE KHDLI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [76-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELIKTLVSFS EKARREGLLA LEDDVNELPD EFLRKGITLV VDGTDPELVR NIMETEMGNI  60
   61 ASRHNNGKAW WENWGALAPA FGMIGTLIGL VQMLKNLGSG DPSAIGTGMA AALITTLYGS 120
  121 MGANMFAIPV MKKLIRKSED ELTIKQIMIE GTLSIQSGDN PRIVKDKLSS FLPPSERDVL 180
  181 KDEGE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 8.173925
Match: PF01618.7
Description: No description for PF01618.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle