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View Structure Prediction Details

Protein: gi|24212809, gi|...
Organism: Leptospira interrogans serovar Lai str. 56601
Length: 182 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24212809, gi|....

Description E-value Query
Range
Subject
Range
gi|48845785, gi|... - gi|78224713|ref|YP_386460.1| 2',5' RNA ligase [Geobacter metallireducens GS-15], gi|78195968|gb|ABB3...
196.0 [0..1] [178..1]

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Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTFLGISIP EEIKEQLTSI CYGLSDIRWV PKENFHITLV FLGEQSSECL DILSDFCSEI  60
   61 SFTEFDLSLK SVGTFGKQKS PSILFAAVKP SIELSQLHKT LDSGIRKLGF SIDRQNYQPH 120
  121 LTIGRFKNSN ETRVIMYLEE FANFVSSNFK VSEFHIYSSK TFSNGPVYSI EESFSLLPSY 180
  181 KI

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Detection Method: PSI-BLAST
Confidence: 49.39794
Match: 1vdxA
Description: Crystal Structure of a Pyrococcus horikoshii protein with similarities to 2'5' RNA-ligase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle