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View Structure Prediction Details

Protein: gi|45602582, gi|...
Organism: Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
Length: 422 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|45602582, gi|....

Description E-value Query
Range
Subject
Range
gi|24217097, gi|... - gi|24217097|ref|NP_714580.1| NADH dehydrogenase [Leptospira interrogans serovar Lai str. 56601], gi|...
306.0 [0..1] [421..1]

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Predicted Domain #1
Region A:
Residues: [1-422]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGESNQKKVV VIGAGFGGLQ AVKKLSQNNN LDITVIDKKN HHLFQPLLYQ VATAVLSPAD  60
   61 IAIPTRSLVG ESKNVTVVLG EATKIDLKTK TVYYQNTSTN YDYLILSAGA RSSYFGNDHW 120
  121 EKYTIGLKNL KDALKIRHKL LISFEKAELS GDPEVVKSLL NYVIIGGGPT GVELAGSIAE 180
  181 LSHQIIRDEF HTIDPALSKI TLIEASPRLL MTFDPSLGEF TKKRLERRGV EVLTGTRVID 240
  241 INERGVQLEG KMIPTQTVIW AAGVQANSIA ATLDVTLDRG GRVIVDEFCN IEGHSEVFVI 300
  301 GDIASYSKGL ERPLPGVSPV AMQQGRYVAS LIQNDLKNKK RKPFHYIDKG SMATIGRTDA 360
  361 VAQVGILKMK GLFGWLAWLF VHLFYQVGFK NKITILITWV WSYIAFRAEA RVIQDEISAD 420
  421 ND

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.221849
Match: 1zy8A
Description: The crystal structure of dihydrolipoamide dehydrogenase and dihydrolipoamide dehydrogenase-binding protein (didomain) subcomplex of human pyruvate dehydrogenase complex.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle