YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39985043, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	217 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39985043, gi|....

Description	E-value	Query Range	Subject Range
gi\|134299758, gi... - gi\|88944800\|ref\|ZP_01148024.1\| Phosphoglycerate mutase/fructose-2,6-bisphosphatase [Desulfotomaculum...	205.0	[0..19]	[216..1]
gi\|146273747, gi... - gi\|98662370\|dbj\|GAA00697.1\| unnamed protein product [Pelotomaculum thermopropionicum SI], gi\|1476776...	200.0	[0..20]	[216..1]
gi\|23508399, gi\|... - gi\|23508399\|ref\|NP_701068.1\| phosphoglycerate mutase, putative [Plasmodium falciparum 3D7], gi\|23496...	194.0	[0..19]	[215..1]
gi\|58177556, gi\|... - gi\|58177557\|pdb\|1XQ9\|B Chain B, Structure Of Phosphoglycerate Mutase From Plasmodium Falciparum At 2...	193.0	[0..19]	[215..9]
gi\|84693499, gi\|... - gi\|84715034\|ref\|ZP_01022256.1\| Phosphoglycerate mutase 1 [Polaromonas naphthalenivorans CJ2], gi\|846...	193.0	[0..11]	[217..27]
gi\|56519729 - gi\|56519729\|emb\|CAH78524.1\| phosphoglycerate mutase, putative [Plasmodium chabaudi chabaudi] gi\|70942433 - gi\|70942433\|ref\|XP_741383.1\| phosphoglycerate mutase [Plasmodium chabaudi chabaudi]	192.0	[0..19]	[215..1]
gi\|67917134, gi\|... - gi\|67917134\|ref\|ZP_00510806.1\| Phosphoglycerate/bisphosphoglycerate mutase [Clostridium thermocellum...	192.0	[0..9]	[216..23]
gi\|110647741, gi... - gi\|110834630\|ref\|YP_693489.1\| phosphoglycerate mutase [Alcanivorax borkumensis SK2], gi\|110647741\|em...	192.0	[0..20]	[217..1]
GPMA_PHOLL - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Photorhabdus luminescens subsp. laumond... GPMA_PHOLL - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Photorhabdus luminescens subsp. laumond...	192.0	[0..19]	[217..1]
gi\|91786788, gi\|... - gi\|91786788\|ref\|YP_547740.1\| phosphoglycerate mutase [Polaromonas sp. JS666], gi\|91696013\|gb\|ABE4284...	192.0	[0..19]	[217..45]

Back

Predicted Domain #1

Region A:
Residues: [1-217]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLPEQTTGI FPSLERNMTR KTRIYLIRHG EVEGAGVPRY NGHNDVGLSE RGKAQYLELR  60
   61 KRFDGVRIAA CYTSDLTRCV WGAESLAAHL NVQPQRHPEL REICMGEWEA KSWQELQDRY 120
  121 PHQWQARLND LEGYRVPGGE NLLDVRARVM PAVNAIVERH RGEDVLVVAH GGVNRIILLE 180
  181 AIGAPLANLF SLEQTYCCMN IIDYFEDGRA VVKLVNG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	45.30103
Match:	2axnA
Description:	Crystal structure of the human inducible form 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits