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View Structure Prediction Details

Protein: gi|39997686, gi|...
Organism: Geobacter sulfurreducens PCA
Length: 260 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39997686, gi|....

Description E-value Query
Range
Subject
Range
gi|13814976, gi|... - gi|15898535|ref|NP_343140.1| transposase ISC1190 [Sulfolobus solfataricus P2], gi|13814976|gb|AAK419...
gi|25394791 - pir||C90334 transposase ISC1190 [imported] - Sulfolobus solfataricus
175.0 [0..14] [255..56]
gi|15921377, gi|... - gi|15921377|ref|NP_377046.1| hypothetical protein ST1122 [Sulfolobus tokodaii str. 7], gi|15622163|d...
164.0 [0..19] [255..64]
gi|85058221, gi|... - gi|85058221|ref|YP_453923.1| transposase [Sodalis glossinidius str. 'morsitans'], gi|84778741|dbj|BA...
162.0 [0..11] [253..6]

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Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFYTKTHKH YCGIDLHAKK MFLCILDAQG EVLLHRNISS SPEAFLKAVA PFRDGLVVGV  60
   61 ECMFAWYWLA DLCRKEGIEF VLGHALYMKA VHGGKAKNDK IDSHKIAVLL RGGSFPVAYV 120
  121 YPPEMRATRD L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.561 0.052 transposase activity a.118.8 TPR-like
View Download 0.483 0.032 transposase activity a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.481 0.016 transposase activity a.29.2 Bromodomain
View Download 0.498 0.010 transposase activity a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.631 0.004 transposase activity b.61.3 D-aminopeptidase, middle and C-terminal domains

Predicted Domain #2
Region A:
Residues: [132-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRRRTHIHGV GQILALVMLY EIHDINRFES VQDFASYCRL VKCSHESAGK KKGSGGAKIG  60
   61 NAHLKWAFSE AAMLFIRYNP PAKKLVENLA KVHGKGKAIG IIAHKLARAI YYMLKNNVPF 120
  121 NLEKFMATA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 10.267606
Match: PF02371.7
Description: No description for PF02371.7 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle