YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39997667, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	225 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39997667, gi|....

Description	E-value	Query Range	Subject Range
gi\|146397061, gi... - gi\|88938036\|ref\|ZP_01143552.1\| Serine O-acetyltransferase [Geobacter uraniumreducens Rf4], gi\|889152...	222.0	[0..1]	[224..1]
gi\|78222090, gi\|... - gi\|78222090\|ref\|YP_383837.1\| Serine O-acetyltransferase [Geobacter metallireducens GS-15], gi\|781933...	208.0	[0..1]	[224..1]
gi\|113476584, gi... - gi\|71677805\|ref\|ZP_00675539.1\| Serine O-acetyltransferase [Trichodesmium erythraeum IMS101], gi\|7166...	206.0	[0..1]	[211..1]
gi\|118501896, gi... - gi\|71838421\|ref\|ZP_00678180.1\| Serine O-acetyltransferase [Pelobacter propionicus DSM 2379], gi\|7174...	204.0	[0..1]	[222..1]
gi\|51894255, gi\|... - gi\|51894255\|ref\|YP_076946.1\| serine O-acetyltransferase [Symbiobacterium thermophilum IAM 14863], gi...	203.0	[0..1]	[223..4]
gi\|17228899, gi\|... - gi\|17228899\|ref\|NP_485447.1\| serine acetyltransferase [Nostoc sp. PCC 7120], gi\|17130751\|dbj\|BAB7336... gi\|25286515 - pir\|\|AI1981 serine acetyltransferase [imported] - Nostoc sp. (strain PCC 7120)	201.0	[0..2]	[216..29]
gi\|541391 - gi\|541391\|pir\|\|E53402 serine O-acetyltransferase (EC 2.3.1.30) cysE [similarity] - Bacillus stearoth...	200.0	[0..1]	[222..2]
gi\|56378461, gi\|... - gi\|56418619\|ref\|YP_145937.1\| serine O-acetyltransferase [Geobacillus kaustophilus HTA426], gi\|563784...	200.0	[0..1]	[222..1]
gi\|75910157, gi\|... - gi\|75910157\|ref\|YP_324453.1\| Serine O-acetyltransferase [Anabaena variabilis ATCC 29413], gi\|7570388...	200.0	[0..2]	[216..29]
gi\|3482889 - gi\|3482889\|gb\|AAC33374.1\| NifP [Cyanothece sp. PCC 8801]	198.0	[0..1]	[210..36]

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Predicted Domain #1

Region A:
Residues: [1-225]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFARLREDIQ SVLDRDPAAR STLEVLCCYP GLHAIWFHRL ANLLWRSDFH FLGRLVSHVG  60
   61 RFLTGIEIHP GATIGRRLFI DHGMGVVIGE TAEIGDDVTI YHGVTLGGVS LEKKKRHPTV 120
  121 ESNAVIGSGA KVLGPFTVGE GAKIGSNSVV VKEVPANATV VGIPGRVVMA AEKPKDKSDF 180
  181 EHGKLPDPEA KAISCLFEQI RELERKYGEL AAEHEALKRR LDGGN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	41.522879
Match:	1t3dA
Description:	Crystal structure of Serine Acetyltransferase from E.coli at 2.2A
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
O-acyltransferase activity	2.96382736707397	bayes_pls_golite062009
catalytic activity	2.59855937987599	bayes_pls_golite062009
serine O-acetyltransferase activity	2.10697394347266	bayes_pls_golite062009
serine O-acyltransferase activity	2.10697394347266	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	2.00406253837813	bayes_pls_golite062009
acyltransferase activity	1.97801068671318	bayes_pls_golite062009
transferase activity, transferring acyl groups	1.94103020303346	bayes_pls_golite062009
O-acetyltransferase activity	1.93041803216972	bayes_pls_golite062009
transferase activity	1.3237300007392	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: