YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39984496, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	254 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39984496, gi|....

Description	E-value	Query Range	Subject Range
gi\|5042285, gi\|2... - gi\|5042285\|emb\|CAB44539.1\| putative bi-functional transferase/deacetylase [Streptomyces coelicolor A... gi\|7480519 - pir\|\|T34632 probable bi-functional transferase/deacetylase - Streptomyces coelicolor	172.0	[0..7]	[246..389]
gi\|29831372, gi\|... - gi\|29831372\|ref\|NP_826006.1\| polysaccharide deacetylase/glycosyl transferase [Streptomyces avermitil...	171.0	[0..7]	[246..436]
gi\|71480773, gi\|... - gi\|71480773\|ref\|ZP_00660482.1\| Glycosyl transferase, family 2 [Prosthecochloris vibrioformis DSM 265...	162.0	[0..3]	[248..106]
gi\|75907071, gi\|... - gi\|75907071\|ref\|YP_321367.1\| glycosyl transferase family protein [Anabaena variabilis ATCC 29413], g...	160.0	[0..1]	[232..1]
gi\|187028529, gi... - gi\|39587882\|emb\|CAE67900.1\| Hypothetical protein CBG13497 [Caenorhabditis briggsae], gi\|187028529\|em... gi\|157759407 - gi\|157759407\|ref\|XP_001672047.1\| Hypothetical protein CBG13497 [Caenorhabditis briggsae AF16]	160.0	[0..2]	[228..1]
gi\|73669425, gi\|... - gi\|73669425\|ref\|YP_305440.1\| glucosaminyltransferase [Methanosarcina barkeri str. Fusaro], gi\|723965...	159.0	[0..2]	[232..44]
gi\|47558704, gi\|... - gi\|47564552\|ref\|ZP_00235597.1\| putative bi-functional transferase/deacetylase [Bacillus cereus G9241...	159.0	[0..2]	[236..751]
gi\|78166746, gi\|... - gi\|78186844\|ref\|YP_374887.1\| glucosaminyltransferase [Pelodictyon luteolum DSM 273], gi\|78166746\|gb\|...	158.0	[0..3]	[248..115]

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Predicted Domain #1

Region A:
Residues: [1-254]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNSRRIVVV LPAYNAEKTL EMTYAEIPFE HVDHVLLVDD ASRDRTAQVA ERLGIKTIVH  60
   61 DRNKGYGANQ KTCYRAALDL GADIVIMVHP DYQYTPKLIT AMAAMIAYGE FDAVLGSRIL 120
  121 GIGALKGGMP LYKYVANRVL TLVENLLLSH KLSEYHTGYR AFSRQVLEQL PLDANGDDFV 180
  181 FDNQMLAQII WHGYRIGELS CPTKYFEDAS SINFRRSVIY GLGVLGTALE FRLARMGLIR 240
  241 SGRFTPRNDQ AAAQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	28.30103
Match:	2d7iA
Description:	No description for 2d7iA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits