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View Structure Prediction Details

Protein: gi|39984394, gi|...
Organism: Geobacter sulfurreducens PCA
Length: 160 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39984394, gi|....

Description E-value Query
Range		 Subject
Range
gi|8671873 - gi|8671873|gb|AAF78436.1|AC018748_15 Contains similarity to 17.6 KD class I heat shock protein from ...
 173.0 [0..3] [160..248]
HSP12_MEDSA - 18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1
 170.0 [0..3] [160..2]
HSP16_SOYBN - 18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1
 165.0 [0..3] [160..2]
gi|87240494 - gi|87240494|gb|ABD32352.1| Heat shock protein Hsp20 [Medicago truncatula]
 165.0 [0..3] [160..2]
gi|41059801 - gi|41059801|gb|AAR99375.1| small heat shock protein [Prunus persica]
 164.0 [0..7] [160..4]

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Predicted Domain #1
Region A:
Residues: [1-160] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLLPEKWG EALERVHDKV GHFLTRVMPW KKQEHFPERI TADTLPAFMQ SGGPLLDMHE  60
   61 TADELIIRAE VPGLKNDDFS VGIVGRRLTI KGEKNIVRER KGGDGCLISE CRYGSFARTL 120
  121 QLPYEIDEKA IAADLKHGVL TIRLPKPEKG RHARYRVPIS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.69897
Match: 1gmeA
Description: Small heat shock protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.20758866613061 bayes_pls_golite062009
catalytic activity 0.63074808892513 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle