YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39984272, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	267 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39984272, gi|....

Description	E-value	Query Range	Subject Range
gi\|168204744, gi... - gi\|170663676\|gb\|EDT16359.1\| diacylglycerol kinase/PAP2 family protein [Clostridium perfringens E str... gi\|170713180, gi... - gi\|170713180\|gb\|EDT25362.1\| diacylglycerol kinase/PAP2 family protein [Clostridium perfringens B str... gi\|170715526, gi... - gi\|170715526\|gb\|EDT27708.1\| diacylglycerol kinase/PAP2 family protein [Clostridium perfringens CPE s... gi\|110674496, gi... - gi\|110799849\|ref\|YP_696697.1\| diacylglycerol kinase/PAP2 family protein [Clostridium perfringens ATC... gi\|168215644, gi... - gi\|182382267\|gb\|EDT79746.1\| diacylglycerol kinase/PAP2 family protein [Clostridium perfringens NCTC ... gi\|182624413, gi... - gi\|182624413\|ref\|ZP_02952197.1\| diacylglycerol kinase/PAP2 family protein [Clostridium perfringens D...	163.0	[0..33]	[263..1]
gi\|18310999, gi\|... - gi\|18310999\|ref\|NP_562933.1\| diacylglycerol kinase/PAP2 family protein [Clostridium perfringens str.... gi\|110683482, gi... - gi\|110802981\|ref\|YP_699298.1\| diacylglycerol kinase/PAP2 family protein [Clostridium perfringens SM1...	163.0	[0..33]	[263..1]
gi\|28204085, gi\|... - gi\|28211643\|ref\|NP_782587.1\| diacylglycerol kinase [Clostridium tetani E88], gi\|28204085\|gb\|AAO36524...	162.0	[0..33]	[263..1]
gi\|15024223, gi\|... - gi\|15894576\|ref\|NP_347925.1\| bifunctional diacylglycerol kinase/phosphatase B [Clostridium acetobuty... gi\|25499786 - pir\|\|F97059 diacylglycerol kinase (dgkA) fused to phosphatase B domain (pgpB) [imported] - Clostrid...	160.0	[0..33]	[264..1]
gi\|150015730, gi... - gi\|82745426\|ref\|ZP_00907938.1\| Phosphoesterase, PA-phosphatase related [Clostridium beijerincki NCIM...	153.0	[0..33]	[265..1]
gi\|20807453 - gi\|20807453\|ref\|NP_622624.1\| Diacylglycerol kinase [Thermoanaerobacter tengcongensis MB4] gi\|20515978, gi\|... - gi\|20807453\|ref\|NP_622624.1\| diacylglycerol kinase [Thermoanaerobacter tengcongensis MB4], gi\|205159...	151.0	[0..33]	[264..1]
gi\|77687363, gi\|... - gi\|77687363\|ref\|ZP_00802611.1\| Phosphoesterase, PA-phosphatase related:Prokaryotic diacylglycerol ki...	149.0	[0..33]	[263..1]
gi\|78194827, gi\|... - gi\|78223572\|ref\|YP_385319.1\| phosphoesterase, PA-phosphatase related [Geobacter metallireducens GS-1...	147.0	[0..19]	[267..13]
gi\|110549047, gi... - gi\|222056178\|ref\|YP_002538540.1\| diacylglycerol kinase [Geobacter sp. FRC-32], gi\|221565467\|gb\|ACM21...	146.0	[0..33]	[264..1]
gi\|241883460, gi... - gi\|241904173\|ref\|ZP_04788880.1\| diacylglycerol kinase [Thermoanaerobacter brockii subsp. finnii Ako-... gi\|167037776, gi... - gi\|76797148\|ref\|ZP_00779486.1\| Phosphoesterase, PA-phosphatase related:Prokaryotic diacylglycerol ki... gi\|242231327, gi... - gi\|242257150\|ref\|ZP_04802024.1\| diacylglycerol kinase [Thermoanaerobacter sp. X513], gi\|242231327\|gb... gi\|166854224, gi... - gi\|167039984\|ref\|YP_001662969.1\| diacylglycerol kinase [Thermoanaerobacter sp. X514], gi\|166854224\|g...	141.0	[0..33]	[264..1]

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Predicted Domain #1

Region A:
Residues: [1-153]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSSPSSRTA DLSSSGQWKD GSPQEERAPG APLKPSRFID SANCAIEGIL WASRTQPHMR  60
   61 YHFLAALGLL VAVLFLRVTP LEFTLLAVSV AFVLFAELMN TAVEAVVDLV SPGYHPLAKI 120
  121 AKDVAAGGVL TAAIGAAVMG YLILSKYIFP IYK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	23.823909
Match:	PF01219.10
Description:	No description for PF01219.10 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [154-267]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EALAMIGTPT EMGTVVALLV VVIVVVILKS LSGRGTPLEG GLPSGHAAVA FGIATVVSLS  60
   61 TQDPLISILT IALAVMVSHS RLLLNIHTMR EVVLGAITGT AISALVLTLF RILK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	15.221849
Match:	1d2tA
Description:	Bacterial acid phosphatase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits