YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39997170, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	207 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39997170, gi|....

Description	E-value	Query Range	Subject Range
gi\|62896372 - gi\|62896372\|emb\|CAH94396.1\| putative 1-acylglycerol-3-phosphate O-acyltransferase [Streptomyces gris...	160.0	[0..1]	[207..46]
gi\|110817658, gi... - gi\|111018128\|ref\|YP_701100.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Rhodococcus jostii RHA...	158.0	[0..3]	[205..6]
gi\|54015188, gi\|... - gi\|54023680\|ref\|YP_117922.1\| putative 1-acylglycerol-3-phosphate O-acyltransferase [Nocardia farcini...	157.0	[0..2]	[205..1]
gi\|148823389, gi... - gi\|76784067\|ref\|ZP_00771254.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Mycobacteriu... gi\|148661998, gi... - gi\|167967125\|ref\|ZP_02549402.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|124601395, gi... - gi\|81253812\|ref\|ZP_00878344.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Mycobacteriu... gi\|197740798, gi... - gi\|254364981\|ref\|ZP_04981027.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|215431114 - gi\|215431114\|ref\|ZP_03429033.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|215446410 - gi\|215446410\|ref\|ZP_03433162.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|255096988 - gi\|255096988\|ref\|ZP_05326466.1\| 1-acylglycerol-3-phosphate O-acyltransferase [Mycobacterium tubercul... gi\|218753903 - gi\|218753903\|ref\|ZP_03532699.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|254816003 - gi\|254816003\|ref\|ZP_05221004.1\| 1-acylglycerol-3-phosphate O-acyltransferase [Mycobacterium tubercul... gi\|219558159 - gi\|219558159\|ref\|ZP_03537235.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|254551219 - gi\|254551219\|ref\|ZP_05141666.1\| 1-acylglycerol-3-phosphate O-acyltransferase [Mycobacterium tubercul... gi\|224990556, gi... - gi\|224990556\|ref\|YP_002645243.1\| 1-acylglycerol-3-phosphate O-acyltransferase [Mycobacterium bovis B... gi\|253320257, gi... - gi\|253798754\|ref\|YP_003031755.1\| 1-acylglycerol-3-phosphate O-acyltransferase [Mycobacterium tubercu... gi\|7477100 - pir\|\|H70936 1-acylglycerol-3-phosphate O-acyltransferase (EC 2.3.1.51) homolog Rv2182c - Mycobacteri... gi\|2911102, gi\|1... - gi\|2911102\|emb\|CAA17486.1\| 1-acylglycerol-3-phosphate O-acyltransferase [Mycobacterium tuberculosis ... gi\|31793360, gi\|... - gi\|31793360\|ref\|NP_855853.1\| 1-acylglycerol-3-phosphate O-acyltransferase [Mycobacterium bovis AF212... gi\|215403571 - gi\|215403571\|ref\|ZP_03415752.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|215411906 - gi\|215411906\|ref\|ZP_03420680.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|121493710, gi... - gi\|121638062\|ref\|YP_978286.1\| 1-acylglycerol-3-phosphate O-acyltransferase [Mycobacterium bovis BCG ... gi\|215427558 - gi\|215427558\|ref\|ZP_03425477.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|13881926, gi\|... - gi\|15841672\|ref\|NP_336709.1\| acyltransferase family protein [Mycobacterium tuberculosis CDC1551], gi...	157.0	[0..3]	[205..6]
gi\|78193409, gi\|... - gi\|78222154\|ref\|YP_383901.1\| phospholipid/glycerol acyltransferase [Geobacter metallireducens GS-15]...	156.0	[0..1]	[206..11]
gi\|86741774, gi\|... - gi\|86741774\|ref\|YP_482174.1\| phospholipid/glycerol acyltransferase [Frankia sp. CcI3], gi\|86568636\|g...	156.0	[0..2]	[207..8]
gi\|83573091, gi\|... - gi\|83590177\|ref\|YP_430186.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferases [Moorella thermoacetica...	155.0	[0..3]	[198..5]
gi\|25347004, gi\|... - gi\|3080493\|emb\|CAA18690.1\| hypothetical protein MLCB268.24c [Mycobacterium leprae], pir\|\|F87020 prob... gi\|15827414 - gi\|15827414\|ref\|NP_301677.1\| acyltransferase [Mycobacterium leprae TN] gi\|219932998, gi... - gi\|221229891\|ref\|YP_002503307.1\| putative acyltransferase [Mycobacterium leprae Br4923], gi\|21993299...	155.0	[0..3]	[205..6]
gi\|88911512, gi\|... - gi\|88932565\|ref\|ZP_01138255.1\| Phospholipid/glycerol acyltransferase [Acidothermus cellulolyticus 11...	155.0	[0..2]	[207..4]
gi\|146398392, gi... - gi\|88936374\|ref\|ZP_01141985.1\| Phospholipid/glycerol acyltransferase [Geobacter uraniumreducens Rf4]...	155.0	[0..1]	[205..11]

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Predicted Domain #1

Region A:
Residues: [1-207]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFSAFVVGS YASLINRFRV KGVEHIPRDG GALIASNHIS AYETIFLPWA ILRYHPFRMV  60
   61 WAPAKEELFA KPFQRFLYSS WGAFPVKRGR DVRAGKTIND LLRTEKVMLF PEGTRHKDGV 120
  121 LGKGNRGVGK IIYDTRVTVI PTALIGLNRW KFPGLGQEGM VVFGAPLELD DLFARDDCKE 180
  181 THQLIVDRVM AAIADLLKGE DAYVGRS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	9.221849
Match:	1iuqA
Description:	The 1.55 A Crystal Structure of Glycerol-3-Phosphate Acyltransferase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits