YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39997159, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	149 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39997159, gi|....

Description	E-value	Query Range	Subject Range
gi\|76165215, gi\|... - gi\|76259963\|ref\|ZP_00767606.1\| GCN5-related N-acetyltransferase [Chloroflexus aurantiacus J-10-fl], ...	139.0	[0..2]	[149..45]
gi\|68184783, gi\|... - gi\|91772131\|ref\|YP_564823.1\| N-acetylglutamate synthase [Methanococcoides burtonii DSM 6242], gi\|917...	138.0	[0..1]	[149..1]
gi\|88918275, gi\|... - gi\|88935010\|ref\|ZP_01140648.1\| acetyltransferase, GNAT family [Geobacter uraniumreducens Rf4], gi\|88...	135.0	[0..1]	[149..1]
gi\|78222166, gi\|... - gi\|78222166\|ref\|YP_383913.1\| acetyltransferase [Geobacter metallireducens GS-15], gi\|78193421\|gb\|ABB...	134.0	[0..1]	[149..1]
gi\|20905469, gi\|... - gi\|21227137\|ref\|NP_633059.1\| acetyltransferase [Methanosarcina mazei Go1], gi\|20905469\|gb\|AAM30731.1...	131.0	[0..1]	[147..9]
gi\|95930185, gi\|... - gi\|95930185\|ref\|ZP_01312924.1\| GCN5-related N-acetyltransferase [Desulfuromonas acetoxidans DSM 684]...	130.0	[0..1]	[149..1]
gi\|118581058, gi... - gi\|71838221\|ref\|ZP_00677982.1\| GCN5-related N-acetyltransferase [Pelobacter propionicus DSM 2379], g...	130.0	[0..1]	[149..1]
gi\|110549410, gi... - gi\|222056541\|ref\|YP_002538903.1\| GCN5-related N-acetyltransferase [Geobacter sp. FRC-32], gi\|2215658...	128.0	[0..1]	[149..1]
gi\|71544170, gi\|... - gi\|71544170\|ref\|ZP_00665221.1\| GCN5-related N-acetyltransferase [Syntrophobacter fumaroxidans MPOB],...	126.0	[0..1]	[149..10]
gi\|51246603, gi\|... - gi\|51246603\|ref\|YP_066487.1\| acetyltransferase [Desulfotalea psychrophila LSv54], gi\|50877640\|emb\|CA...	126.0	[0..1]	[148..8]

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Predicted Domain #1

Region A:
Residues: [1-149]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRKAQIADV KDIQKLLTHF ASRGDMLSRS LSELYEAIRD FYVWEENGVV LGAAALHIMW  60
   61 EDLAEIRSVA VSEDAGRKGI GTMLVQACID EARQLGLKRV FCLTYKPDFF GKFGMRIVDK 120
  121 SELPHKVWTD CIKCVKFPDC DEIAMILDL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	17.522879
Match:	1yr0A
Description:	Crystal structure of phosphinothricin acetyltransferase from agrobacterium tumefaciens
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	2.34977492703662	bayes_pls_golite062009
transferase activity	1.85190002724385	bayes_pls_golite062009
transferase activity, transferring acyl groups	1.75772333794819	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	1.63399963366073	bayes_pls_golite062009
acyltransferase activity	1.60091210227059	bayes_pls_golite062009
N-acyltransferase activity	1.18143103040425	bayes_pls_golite062009
acetyltransferase activity	1.12147423121182	bayes_pls_golite062009
N-acetyltransferase activity	0.796917859235554	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: