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View Structure Prediction Details

Protein: gi|39996945, gi|...
Organism: Geobacter sulfurreducens PCA
Length: 277 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39996945, gi|....

Description E-value Query
Range
Subject
Range
gi|148265205, gi... - gi|88936686|ref|ZP_01142288.1| similar to Sugar transferases involved in lipopolysaccharide synthesi...
342.0 [0..1] [276..193]
gi|28849822 - gi|28849822|gb|AAN64578.1| undecaprenyl-phophate glucose-1-phosphate [Streptococcus gordonii]
337.0 [0..2] [277..185]
gi|24473739 - gi|24473739|gb|AAL23730.1| Eps3E [Streptococcus thermophilus]
337.0 [0..2] [277..182]
gi|20331063 - gi|20331063|gb|AAL82782.1| putative UDP-glucosyl transferase Cps6aE [Streptococcus pneumoniae]
333.0 [0..3] [277..183]

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Predicted Domain #1
Region A:
Residues: [1-71]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQLVDICKS NPVDEVVFCL SRQWEENIDD YLHDLEEMGI TVRMVLDHYE MRISRREMSM  60
   61 FHDEIPILTF Y

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.836 N/A N/A d.79.3 L30e-like

Predicted Domain #2
Region A:
Residues: [72-277]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKNFDATQLF LKRCLDFLGS TIGLLITGAL YPFIALAIRF DSPGPIFFGQ ERVGENGRIF  60
   61 KCWKFRSMYV DAEERKKELE HLNEMSGAIF KIAHDPRITR VGKFLRKTSL DELPQFWNVF 120
  121 RGEMSLVGTR PPTPDEVAKY ENWQRRRISI RPGITGLWQV SGRNRINEFD EIVKLDLKYI 180
  181 DQWSIWLDLK IIFKTVGVVF FGTGAQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 106.769551
Match: PF02397.7
Description: No description for PF02397.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle