YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39996924, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	197 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39996924, gi|....

Description	E-value	Query Range	Subject Range
gi\|66768322, gi\|... - gi\|66768322\|ref\|YP_243084.1\| CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase [Xant...	147.0	[0..10]	[196..3]
gi\|221565210, gi... - gi\|222055921\|ref\|YP_002538283.1\| CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase [...	138.0	[0..1]	[197..1]
gi\|48846107, gi\|... - gi\|78223159\|ref\|YP_384906.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Geo...	135.0	[0..1]	[197..1]
gi\|21113243, gi\|... - gi\|21231558\|ref\|NP_637475.1\| CDP-diacylglycerol-glycerol-3- phosphate 3-phosphatidyltransferase [Xan... gi\|188991461, gi... - gi\|188991461\|ref\|YP_001903471.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase ...	134.0	[0..10]	[196..3]
gi\|118580188, gi... - gi\|71837178\|ref\|ZP_00676944.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [P...	134.0	[0..1]	[197..1]
gi\|110834167, gi... - gi\|110834167\|ref\|YP_693026.1\| CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltrans [Alcanivor...	133.0	[0..9]	[197..7]
gi\|21108319, gi\|... - gi\|21242832\|ref\|NP_642414.1\| CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase [Xant... gi\|78047816, gi\|... - gi\|78047816\|ref\|YP_363991.1\| CDP-diacylglycerol-glycerol-3-phosphate3- phosphatidyltransferase [Xant...	132.0	[0..10]	[196..3]
gi\|58426508, gi\|... - gi\|58581914\|ref\|YP_200930.1\| CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase [Xant... gi\|84367766, gi\|... - gi\|84623826\|ref\|YP_451198.1\| CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase [Xant... gi\|188520966, gi... - gi\|188576514\|ref\|YP_001913443.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase ...	131.0	[0..10]	[196..3]
gi\|95928904, gi\|... - gi\|95928904\|ref\|ZP_01311650.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [D...	129.0	[0..10]	[195..8]
gi\|254479112, gi... - gi\|254479112\|ref\|ZP_05092464.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|20516383, gi\|... - gi\|20807823\|ref\|NP_622994.1\| phosphatidylglycerophosphate synthase [Thermoanaerobacter tengcongensis... gi\|20807823 - gi\|20807823\|ref\|NP_622994.1\| Phosphatidylglycerophosphate synthase [Thermoanaerobacter tengcongensis...	129.0	[0..10]	[196..1]

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Predicted Domain #1

Region A:
Residues: [1-197]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPESASTIW NVPNILTLVR IALIPVMAVL LLSPSKEAGF WAAAVFAIAS VTDWLDGYLA  60
   61 RKMEIVTVFG KFLDPIADKL MVMAALIMVL PFNRIPAWMV LVILGREIII TGLRGIASTE 120
  121 GIVIPASDLG KFKTIFQIVA ILGILLHFDY HWFFGIDHPY LYVNMHNVGM FYLWIATIIT 180
  181 IWSGVDYLVK FTKVIAR

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	30.366532
Match:	PF01066.12
Description:	No description for PF01066.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits