YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39996856, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	160 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39996856, gi|....

Description	E-value	Query Range	Subject Range
gi\|20807038 - gi\|20807038\|ref\|NP_622209.1\| Acetyltransferase [Thermoanaerobacter tengcongensis MB4] gi\|20807038, gi\|... - gi\|20807038\|ref\|NP_622209.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20515525\|g...	143.0	[0..5]	[149..2]
gi\|167039151, gi... - gi\|167039151\|ref\|YP_001662136.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp.... gi\|76797381, gi\|... - gi\|76797381\|ref\|ZP_00779704.1\| Ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter ethan... gi\|241884906, gi... - gi\|241902652\|ref\|ZP_04787384.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter broc... gi\|242230040, gi... - gi\|242258437\|ref\|ZP_04803241.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp. ...	139.0	[0..5]	[149..1]
gi\|14521872, gi\|... - gi\|5459092\|emb\|CAB50578.1\| N-terminal acetyltransferase [Pyrococcus abyssi GE5], gi\|14521872\|ref\|NP_... gi\|5459092, gi\|7... - pir\|\|D75017 n-terminal acetyltransferase PAB1098 - Pyrococcus abyssi (strain Orsay), gi\|5459092\|emb...	134.0	[0..7]	[155..20]
gi\|219992356, gi... - gi\|89210568\|ref\|ZP_01188956.1\| Ribosomal-protein-alanine acetyltransferase [Halothermothrix orenii H...	134.0	[0..5]	[151..1]
gi\|28204473, gi\|... - gi\|28212030\|ref\|NP_782974.1\| ribosomal-protein-alanine acetyltransferase [Clostridium tetani E88], g...	130.0	[0..1]	[148..1]
gi\|78044332, gi\|... - gi\|78044332\|ref\|YP_359578.1\| ribosomal-protein-alanine acetyltransferase [Carboxydothermus hydrogeno...	130.0	[0..12]	[153..1]
gi\|14590218, gi\|... - gi\|3256685\|dbj\|BAA29368.1\| 172aa long hypothetical acetyltransferase [Pyrococcus horikoshii OT3], gi... gi\|7451125 - pir\|\|A71455 probable acetyltransferase - Pyrococcus horikoshii	130.0	[0..7]	[154..20]
gi\|152022841, gi... - gi\|89203282\|ref\|ZP_01181966.1\| Ribosomal-protein-alanine acetyltransferase [Bacillus cereus subsp. c...	127.0	[0..5]	[150..13]
gi\|146295284, gi... - gi\|82500547\|ref\|ZP_00885956.1\| Ribosomal-protein-alanine acetyltransferase [Caldicellulosiruptor sac...	127.0	[0..8]	[150..6]
gi\|18976639, gi\|... - gi\|18976639\|ref\|NP_577996.1\| ribosomal protein s18 alanine acetyltransferase [Pyrococcus furiosus DS...	127.0	[0..7]	[152..18]

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Predicted Domain #1

Region A:
Residues: [1-160]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTADCPTIM PMTEGDLDEV LQIESDSFPR PWTRDHFVAE LASPRSFPVV ARSPGGLIVG  60
   61 YICPTLLFDE GEILDVAVRR DFRGQGIGAL LVTHAVAELA GRGARTVHLE VRVSNTSART 120
  121 LYRRLGFAET GRRPRYYENG EDAVLMTYST DEGEGSPHAV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	21.522879
Match:	2cnmA
Description:	No description for 2cnmA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits